Table A1.
Codon – anticodon recognition patterns and codon usage of D. glaucum chloroplast genome.
| Codon | Amino Acid | RSCU | tRNA | Codon | Amino Acid | RSCU | tRNA |
|---|---|---|---|---|---|---|---|
| UUU | Phe | 1.3 | trnF-GAA | UAU | Tyr | 1.45 | trnY-GUA |
| UUC | Phe | 0.7 | UAC | Tyr | 0.55 | ||
| UUA | Leu | 1.76 | trnL-UAA | UAA | Stop | 1.08 | |
| UUG | Leu | 1.15 | trnL-CAA | UAG | Stop | 0.7 | |
| CUU | Leu | 1.28 | trnL-UAG | CAU | His | 1.5 | trnH-GUG |
| CUC | Leu | 0.52 | CAC | His | 0.5 | ||
| CUA | Leu | 0.86 | CAA | Gln | 1.52 | trnQ-UUG | |
| CUG | Leu | 0.42 | CAG | Gln | 0.48 | ||
| AUU | Ile | 1.46 | trnI-GAU | AAU | Asn | 1.43 | trnN-GUU |
| AUC | Ile | 0.73 | AAC | Asn | 0.57 | ||
| AUA | Ile | 0.81 | trnI-CAU | AAA | Lys | 1.48 | trnK-UUU |
| AUG | Met | 1 | trnM-CAU | AAG | Lys | 0.52 | |
| GUU | Val | 1.45 | trnV-GAC | GAU | Asp | 1.51 | trnD-GUC |
| GUC | Val | 0.73 | GAC | Asp | 0.49 | ||
| GUA | Val | 1.27 | GAA | Glu | 1.45 | trnE-UUC | |
| GUG | Val | 0.54 | trnV-UAC | GAG | Glu | 0.55 | |
| UCU | Ser | 1.44 | trnS-GGA | UGU | Cys | 1.2 | trnC-GCA |
| UCC | Ser | 0.92 | UGC | Cys | 0.8 | ||
| UCA | Ser | 1.3 | UGA | Stop | 1.22 | ||
| UCG | Ser | 0.69 | trnS-UGA | UGG | Trp | 1 | trnW-CCA |
| CCU | Pro | 1.4 | trnP-UGG | CGU | Arg | 0.83 | trnR-ACG |
| CCC | Pro | 0.78 | CGC | Arg | 0.32 | trnR-UCU | |
| CCA | Pro | 1.19 | CGA | Arg | 1.12 | ||
| CCG | Pro | 0.63 | CGG | Arg | 0.49 | ||
| ACU | Thr | 1.29 | AGA | Arg | 0.99 | ||
| ACC | Thr | 0.86 | AGG | Arg | 0.65 | ||
| ACA | Thr | 1.23 | trnT-GGU | AGU | Ser | 2.07 | trnS-GCU |
| ACG | Thr | 0.61 | trnT-UGU | AGC | Ser | 1.18 | |
| GCU | Ala | 1.62 | trnA-UGC | GGU | Gly | 1.09 | |
| GCC | Ala | 0.65 | GGC | Gly | 0.51 | ||
| GCA | Ala | 1.24 | GGA | Gly | 1.54 | ||
| GCG | Ala | 0.49 | GGG | Gly | 0.86 | trnG-UCC |