| 3D | Three dimensional |
| 3C | Chromosome Conformation Capture |
| dSCC | Distance Spearman Correlation Coefficient. |
| dPCC | Distance Pearson Correlation Coefficient. |
| dRMSE | Distance Root Mean Squared Error. |
| CBCR | Curriculum Based Chromosome Reconstruction. |
| GSDB | Genome Structure Database |
| FISH | Fluorescence in Situ Hybridization |
| ChIA-PET | Chromatin Interaction Analysis by Paired-End Tag Sequencing |
| HiChIP | Hi-C Chromatin Immunoprecipitation |
| GEO | Gene Expression Omnibus |
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