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. 2021 Apr 16;11(4):586. doi: 10.3390/biom11040586

Table 4.

Conditions for performing the polyenzymatic cascades of nucleoside synthesis with recombinant thermophilic and mesophilic enzymes with various D-pentoses.

Nucleoside 2ClAde Conc., mM ATP Conc., mM D-Pentose Conc. Enzyme Ratio, Units Max. Nucleoside Content, %
RK PPM PNP
Thermus thermophilus
Ribo-2ClAde 0.34 2.5 2 mM
D-ribose
0.3 * 0.1 0.5 ** 78 (30 min)
dRibo-2ClAde 2 mM
2-deoxy-D-ribose
0.3 * 0.1 0.5 ** 61 (30 min)
Ara-2ClAde 60 mM
D-arabinose
11 * 1 10 ** 52 (4 h)
Xylo-2ClAde 60 mM
D-xylose
11 * 1 10 ** 4 (24 h)
Clofarabine 10 mM
2-deoxy-2-fluoro-D-arabinose
6 * 1 10 ** 19 (24 h)
Escherichia coli
Ribo-2ClAde 0.34 2.5 2 mM D-ribose 0.2 0.1 0.4 91 (1 h)
dRibo-2ClAde 2 mM
2-deoxy-D-ribose
0.2 0.1 0.4 73 (30 min)
Ara-2ClAde 60 mM
D-arabinose
5 1 9 67 (1 h)
Xylo-2ClAde 60 mM
D-xylose
5 1 9 26 (24 h)
Clofarabine 10 mM
2-deoxy-2-fluoro-D-arabinose
6 1 4 46 (24 h)

* Ribokinase from Thermus species 2.9 (TspRK, gene QT17_05185) [23] was used. ** Purine nucleoside phosphorylase II (TthPNPII) was used.