Table 7.
Distribution of plasmids identified among the studied S. Typhimurium genomes using the PLSDB webserver [24].
| Plasmid | Accession Number |
Length (bp) | DP_F10 (DT104b) |
DP_N16 (DT104b) |
DP_N28 (DT104b) |
JE_2727 (DT104b) |
DT104b ref. (DT104b) |
JM_04.26 (DT104) |
MC_04-0529 (DT104) |
R13 (DT104) |
TM75-404 (DT104) |
DT104 ref. (DT104) |
LT2 (DT4) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| pSC-09-1 | NZ_CP028319.1 | 94,045 | + | + | + | + | − | + | + | + | + | + | − |
| p1PCN033 | NZ_CP006633.1 | 3319 | + | + | + | + | − | − | − | − | − | − | − |
| unnamed 2 * | NZ_CP043666.1 | 4593 | + | + | + | − | − | − | − | − | − | − | − |
| pSE81-1705-3 | NZ_CP018654.1 | 33,784 | + | + | + | + | + | + | + | + | + | + | + |
| plasmid 3 * | NZ_LN868945.1 | 147,787 | + | + | + | + | + | + | + | + | + | + | + |
| pCERC1 | NC_019070.1 | 6790 | − | + | + | − | − | − | − | − | − | − | − |
| Punnamed 4 * | NZ_CP036207.1 | 4149 | − | − | − | + | − | − | − | − | − | − | − |
| plasmid: 2 ** | NZ_LT855377.1 | 93,862 | − | − | − | − | + | − | − | − | − | − | − |
| pAUSMDU00010534_03 | NZ_CP045935.1 | 57,073 | − | − | − | − | − | − | − | + | − | − | − |
| pSLT | NC_003277.2 | 93,939 | − | − | − | − | − | − | − | − | − | − | + *** |
+, identified; − unidentified; unnamed 2 *, Salmonella enterica subsp. enterica serovar Kentucky strain 161,365 plasmid unnamed 2; plasmid 3 *, Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 3; punnamed 4 *, Escherichia coli strain L725 plasmid unnamed 4; plasmid: 2 **, linear topology, Salmonella enterica subsp. enterica serovar Typhimurium isolate STMU2UK genome assembly, plasmid: 2 *** confirmed by PlasmidFinder-2.0 Server (https://cge.cbs.dtu.dk/services/PlasmidFinder/, accessed on 1 March 2021).