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. 2021 Apr 26;22(Suppl 2):65. doi: 10.1186/s12859-021-03963-6

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© The Author(s) 2021

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 5 — Color classification and LIPR for Strategy2 ( ${PSM}_{2}$ ). Number of PSMs in the three color categories and average LIPR according to minimum shift SPC (left). Percentage of PSMs in the three color categories (Green: solid line, Orange: dotted and dashed line, Red: dashed line) according to shift SPC (right). The vertical line is located at FDR < 1% (shift SPC = 21)