Table 3.
Proteins involved in hormone biosynthesis and signaling with significant changes in abundance at 24, 48 and 96 h post-inoculation with P. infestans.
| 24 h | 48 h | 96 h | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Gene Accession | Protein Description | Arabidopsis Homolog | # rep a |
log2 ratio b | p c | # rep a |
log2 ratio b | p c | # rep a |
log2 ratio b | p c |
| Solyc07g049530 | 1-aminocyclopropane-1-carboxylate oxidase 1 (ACO1) | AT1G05010 | 3 | 0.109 | 0.521 | 3 | 0.877 | 0.007 | 3 | 2.288 | 0.012 |
| Solyc04g015750 | cobN/magnesium chelatase (CHLH/ABAR) | AT5G13630 | 3 | 0.629 | 0.042 | 3 | 0.155 | 0.625 | 3 | −1.239 | 0.031 |
| Solyc01g099160 | lipoxygenase (Lox) | AT1G55020 | 0 | ND | ND | 3 | 2.067 | 0.003 | 3 | 3.063 | 0.055 |
| Solyc08g029000 | lipoxygenase (Lox) | AT1G55020 | 3 | −0.291 | 0.527 | 3 | 1.889 | 0.003 | 3 | 3.804 | 0.008 |
| Solyc03g122340 | lipoxygenase D (LoxD) | AT1G17420 | 3 | −0.611 | 0.046 | 3 | −0.453 | 0.394 | 1 | −1.177 | NQ |
| Solyc12g062290 | protease do-like 9 (DEGP9) | AT5G40200 | 3 | 0.133 | 0.268 | 3 | −0.588 | 0.011 | 2 | 0.000 | NQ |
| Solyc01g100050 | topless 3 (TPL3) | AT5G27030 | 3 | 0.205 | 0.067 | 3 | 0.307 | 0.188 | 3 | 0.817 | 0.004 |
a Number of biological replicates in which the protein was quantifiable. b The average log2 ratio of protein quantity representing (inoculated/mock) from three biological replicates. c The p-value was calculated by Student’s t-test if the protein could be quantified from three biological replicates. Color codes: red, significant quantity change with greater than 0.58 of log2 ratio (p < 0.05); blue, significant quantity change less than −0.58 of log2 ratio; grey, no significant change between the inoculated and mock group (p ≥ 0.05) or not quantified in all three replicates (NQ); white, the quantity change is between 0.58 and −0.58 of log2 ratio (p < 0.05).