Ascl1	Achete-scute family bHLH transcription factor 1
Atoh1	Atonal bHLH transcription factor 1
Barhl1	BarH-like homeobox 1
Bdnf	Brain-derived neurotrophic factor
bHLHe22 (bHLHb5)	Basic helix–loop–helix family member e22
Chrna9	Cholinergic receptor, nicotinic, alpha polypeptide 9 (α9-acetylcholine)
Cdkn1b (p27Kip)	Cyclin-dependent kinase inhibitor 1b
Dicer1	Dicer 1, ribonuclease type III
Eya1	EYA transcriptional coactivator, and phosphatase 1 (eyes absent homolog 1)
Gata3	GATA-binding protein 3
Gdf7	Growth differentiation factor 7
Gfi1	Growth factor independent 1 transcription repressor
Fgf8	Fibroblast growth factor 8
Fgfr1	Fibroblast growth factor receptor 1
Foxd3	Forkhead box D3
Foxg1	Forkhead box G1
Foxp2	Forkhead box P2
Fzd3/6	Frizzled class receptor 3/6
Insm1	Insulinoma-associated 1
Isl1	ISL1 transcription factor, LIM/homeodomain
Lhx2/9	LIM homeobox protein 2/9
Lmx1a/b	LIM homeobox transcription factor 1 alpha/beta
Myo7a	Myosin VIIA
Neurod1	Neurogenic differentiation 1
Neurog1/2	Neurogenin 1/2
Nhlh1	Nescient helix loop helix 1 (Nscl1)
Nhlh2	Nescient helix loop helix 2 (Nscl2)
Nmyc2	Neuroblastoma myc-related oncogene 2
Npr2	Natriuretic peptide receptor 2
Ntf3	Neurotrophin 3 (Nt3)
Ntrk2	Neurotrophic tyrosine kinase, receptor, type 2 (TrkB)
Ntrk3	Neurotrophic tyrosine kinase, receptor, type 3 (TrkC)
Olig3	Oligodendrocyte transcription factor 3
Pax2/8	Paired box 2/8
Phox2b	Paired-like homeobox 2b
Pou4f1,3	POU domain, class 4 transcription factor 1/3
Prickle1	Prickle planar cell polarity protein 1
Ptf1a	Pancreas-specific transcription factor, 1a
Rest	RE1-silencing transcription factor (REST)
Six1	Sine oculis-related homeobox 1
Smarca4	SWI/SNF related, matrix associated, actin-dependent regulator of chromatin, subfamily a, member 4 (Brg1)
Sox2	SRY (sex-determining region Y)-box 2
Srrm4	Serine/arginine repetitive matrix 4
Tbr1	T-box brain transcription factor 1
Tlx3	T cell leukemia, homeobox 3
Vangl2	VANGL planar cell polarity 2
Wnt1/3a	Wingless-type MMTV integration site family, member 1/3a