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. 2021 Apr 23;63:e38. doi: 10.1590/S1678-9946202163038

Table 1. Characteristics of seven infected or colonized patients and of each E. coli strain harboring mcr-1 from three Brazilian hospitals, between 2016-2018.

Patient 1 2 3 4 5 6 7
Gender Female Female Male Female Female Female Male
Age (in years) 55 87 57 82 77 91 3
Hospital A B C B B B B
Distance from Hospital A NA 6.2 km 2.7 km 6.2 km 6.2 km 6.2 km 6.2 km
Unit Emergency Room Emergency Room Nursery Emergency Room Emergency Room Emergency Room Pediatric intensive care
Date of Isolation March 2016 November 2016 August 2016 April 2017 May 2017 December 2017 January 2018
Source Feces Urine Postoperative Wound Secretion Urine Urine Urine Urine
Underlying Diseases Hepatic encephalopathy, diabetes Urinary tract infection Myocardial revascularization (postoperative wound infection), diabetes Atrioventricular block, urinary tract infection Urinary tract infection Alzheimer, chronic renal failure, breast cancer Neurologic disease
Rural Area Exposure Yes Unknown No Unknown Unknown Unknown No
E. coli ST ST744 ST131 ST10 ST69 ST48 ST354 ST57
GenBank accession number JAATKQ000000000 VHOI00000000 JAATKV000000000 JAATKU000000000 JAATKT000000000 JAATKS000000000 JAATKR000000000
COL MIC >4 µg/mL 4 µg/mL >4 µg/mL >4 µg/mL >4 µg/mL >4 µg/mL >4 mg/mL
MER MIC <1 µg/mL <1µg/mL <1 µg/mL <1 µg/mL <1 µg/mL <1 µg/mL <1 µg/mL
MIC of other antimicrobials (µg/mL) (Resistance) DOX (>16), GEN (>8), TOB (>8), SXT (>4/76), LEVO (>8), TAZ (16), FOT (8), A/S (32/16), TIM (128/2) DOX (16), GEN (>8), TOB (>8), LEVO (>8) DOX (16), SXT (>4/76), AZT (>16), FEP (>16), FOT (>32), A/S2 (>64/32), P/T (>64/4), TIM (>128/2) SXT (>4/76), A/S (32/16) TOB (>8), FEP (16), FOT (32), A/S (64/32) DOX (16), SXT (>4/76), LEVO (>8), FOT (32), A/S (32/16) GEN (>8), SXT (>4/76), LEVO (>8), AZT (16), FOT (>32), A/S (32/16)
Resistance Genes aadA1; aac(3)-VIa; aph(3’)-Ia; aac(6’)Ib-cr; aadA5; aph(6)-Id; aph(3”)-Ib; blaTEM-1B; blaOXA-1; blaCMY-2. mcr-1; aac(6')-Ib-cr. MLS: mph(A); catB4; catA1; sul2; sul1; tet(B); dfrA14; dfrA17 aac(3)-IId; aph(6)-Id; blaTEM-1B; mph(A); sul2; tet(A); mcr-1 * aph(3’)-Ia; aadA2; blaCTX-M-8; blaTEM-1B; mcr-1; Inu(F); floR; qnrS1; sul3; tetA; drfA12 aadA5; blaTEM-1B; mcr-1; mph(A); sul1; sul2; dfrA17 aadB; aadA1; blaCTX-M-2; mcr-1; sul1 aadA1; aadB; strB; strA; blaTEM-1B; mcr-1; mph(B); sul1; sul2; tet(A); dfrA1 aadB; aadA1; blaCTX-M-2; mcr-1; sul1; sul2; dfrA1
Plasmids detected (replicon linked to mcr-1) IncI1; IncQ1; IncX4; IncFIB(AP001918); IncFIC(FII) IncFII(pRSB107); IncFIA; Col(BS512); IncFII(pHN7A8); IncFIB(AP001918); IncX1; (not determined) IncX4; Incl1; IncFIA; IncFIB(AP001918); IncX1; IncFII(pRSB107); IncR IncFIB(AP001918); IncFII(29); IncX4; Col156 ColRNAI; Col(MG828); IncA/C2; IncFIC(FII); Incl1; IncI2; IncFIB(AP001918). p0111; IncQ1; IncX4; IncFII; ColRNAI IncI2; IncFIB(AP001918); IncFIC(FII); Col(MG828)
mcr-1 detected in transconjugant Yes No Yes Yes No Yes Yes
Virulence Factors iroN; tsh; cma; iss; gad gad; sat; iha; iss iss sat; iha; gad; eilA; iss; lpfA; senB iss; iroN; mchF; tsh; gad mcmA; mchF; lpfA; eilA; air; cma; gad Iss; iroN; tsh; cma; gad

NA = not applicable; COL = colistin; MER = meropenem; DOX = doxycycline; GEN = gentamicin; TOB = tobramycin; SXT = trimethoprim-sulfamethoxazole; LEVO = levofloxacin; TAZ = ceftazidime; FOT = cefotaxime; A/S = ampicilin-sulbactam; TIM = ticarcilin-clavulanate; FEP = cefepime; AZT = aztreonam; P/T = piperacilin-tazobactam. iroN (enterobactin siderophore receptor protein); tsh (temperature-sensitive hemagglutinin); cma (colicin M); iss (increased serum survival); gad (glutamate decarboxylase); sat (secreted autotransporter toxin); iha (adherence protein); eilA (salmonella HilA homolog); lpfA (long polar fimbriae); senB (plasmid-encoded enterotoxin); mchF (ABC transporter proein MchF); mcmA (microcin M part of colicin H); air (enteroaggregative immunoglobulin repeat protein).

*

-mcr-1 gene in patient 2 was detected only by PCR and Sanger's sequencing (not by Whole Genome Sequencing).