Table 1. Characteristics of seven infected or colonized patients and of each E. coli strain harboring mcr-1 from three Brazilian hospitals, between 2016-2018.
| Patient | 1 | 2 | 3 | 4 | 5 | 6 | 7 |
| Gender | Female | Female | Male | Female | Female | Female | Male |
| Age (in years) | 55 | 87 | 57 | 82 | 77 | 91 | 3 |
| Hospital | A | B | C | B | B | B | B |
| Distance from Hospital A | NA | 6.2 km | 2.7 km | 6.2 km | 6.2 km | 6.2 km | 6.2 km |
| Unit | Emergency Room | Emergency Room | Nursery | Emergency Room | Emergency Room | Emergency Room | Pediatric intensive care |
| Date of Isolation | March 2016 | November 2016 | August 2016 | April 2017 | May 2017 | December 2017 | January 2018 |
| Source | Feces | Urine | Postoperative Wound Secretion | Urine | Urine | Urine | Urine |
| Underlying Diseases | Hepatic encephalopathy, diabetes | Urinary tract infection | Myocardial revascularization (postoperative wound infection), diabetes | Atrioventricular block, urinary tract infection | Urinary tract infection | Alzheimer, chronic renal failure, breast cancer | Neurologic disease |
| Rural Area Exposure | Yes | Unknown | No | Unknown | Unknown | Unknown | No |
| E. coli ST | ST744 | ST131 | ST10 | ST69 | ST48 | ST354 | ST57 |
| GenBank accession number | JAATKQ000000000 | VHOI00000000 | JAATKV000000000 | JAATKU000000000 | JAATKT000000000 | JAATKS000000000 | JAATKR000000000 |
| COL MIC | >4 µg/mL | 4 µg/mL | >4 µg/mL | >4 µg/mL | >4 µg/mL | >4 µg/mL | >4 mg/mL |
| MER MIC | <1 µg/mL | <1µg/mL | <1 µg/mL | <1 µg/mL | <1 µg/mL | <1 µg/mL | <1 µg/mL |
| MIC of other antimicrobials (µg/mL) (Resistance) | DOX (>16), GEN (>8), TOB (>8), SXT (>4/76), LEVO (>8), TAZ (16), FOT (8), A/S (32/16), TIM (128/2) | DOX (16), GEN (>8), TOB (>8), LEVO (>8) | DOX (16), SXT (>4/76), AZT (>16), FEP (>16), FOT (>32), A/S2 (>64/32), P/T (>64/4), TIM (>128/2) | SXT (>4/76), A/S (32/16) | TOB (>8), FEP (16), FOT (32), A/S (64/32) | DOX (16), SXT (>4/76), LEVO (>8), FOT (32), A/S (32/16) | GEN (>8), SXT (>4/76), LEVO (>8), AZT (16), FOT (>32), A/S (32/16) |
| Resistance Genes | aadA1; aac(3)-VIa; aph(3’)-Ia; aac(6’)Ib-cr; aadA5; aph(6)-Id; aph(3”)-Ib; blaTEM-1B; blaOXA-1; blaCMY-2. mcr-1; aac(6')-Ib-cr. MLS: mph(A); catB4; catA1; sul2; sul1; tet(B); dfrA14; dfrA17 | aac(3)-IId; aph(6)-Id; blaTEM-1B; mph(A); sul2; tet(A); mcr-1 * | aph(3’)-Ia; aadA2; blaCTX-M-8; blaTEM-1B; mcr-1; Inu(F); floR; qnrS1; sul3; tetA; drfA12 | aadA5; blaTEM-1B; mcr-1; mph(A); sul1; sul2; dfrA17 | aadB; aadA1; blaCTX-M-2; mcr-1; sul1 | aadA1; aadB; strB; strA; blaTEM-1B; mcr-1; mph(B); sul1; sul2; tet(A); dfrA1 | aadB; aadA1; blaCTX-M-2; mcr-1; sul1; sul2; dfrA1 |
| Plasmids detected (replicon linked to mcr-1) | IncI1; IncQ1; IncX4; IncFIB(AP001918); IncFIC(FII) | IncFII(pRSB107); IncFIA; Col(BS512); IncFII(pHN7A8); IncFIB(AP001918); IncX1; (not determined) | IncX4; Incl1; IncFIA; IncFIB(AP001918); IncX1; IncFII(pRSB107); IncR | IncFIB(AP001918); IncFII(29); IncX4; Col156 | ColRNAI; Col(MG828); IncA/C2; IncFIC(FII); Incl1; IncI2; IncFIB(AP001918). | p0111; IncQ1; IncX4; IncFII; ColRNAI | IncI2; IncFIB(AP001918); IncFIC(FII); Col(MG828) |
| mcr-1 detected in transconjugant | Yes | No | Yes | Yes | No | Yes | Yes |
| Virulence Factors | iroN; tsh; cma; iss; gad | gad; sat; iha; iss | iss | sat; iha; gad; eilA; iss; lpfA; senB | iss; iroN; mchF; tsh; gad | mcmA; mchF; lpfA; eilA; air; cma; gad | Iss; iroN; tsh; cma; gad |
NA = not applicable; COL = colistin; MER = meropenem; DOX = doxycycline; GEN = gentamicin; TOB = tobramycin; SXT = trimethoprim-sulfamethoxazole; LEVO = levofloxacin; TAZ = ceftazidime; FOT = cefotaxime; A/S = ampicilin-sulbactam; TIM = ticarcilin-clavulanate; FEP = cefepime; AZT = aztreonam; P/T = piperacilin-tazobactam. iroN (enterobactin siderophore receptor protein); tsh (temperature-sensitive hemagglutinin); cma (colicin M); iss (increased serum survival); gad (glutamate decarboxylase); sat (secreted autotransporter toxin); iha (adherence protein); eilA (salmonella HilA homolog); lpfA (long polar fimbriae); senB (plasmid-encoded enterotoxin); mchF (ABC transporter proein MchF); mcmA (microcin M part of colicin H); air (enteroaggregative immunoglobulin repeat protein).
-mcr-1 gene in patient 2 was detected only by PCR and Sanger's sequencing (not by Whole Genome Sequencing).