Table 1.
Targeted genes by name by primers from the countries in the study.
| Country | Target | Sequence | |
|---|---|---|---|
| USA | Nucleoprotein 1 | F | GACCCCAAAATCAGCGAAAT |
| R | TCTGGTTACTGCCAGTTGAATCTG | ||
| P | ACCCCGCATTACGTTTGGTGGACC | ||
| Nucleoprotein 2 | F | TTACAAACATTGGCCGCAAA | |
| R | GCGCGACATTCCGAAGAA | ||
| P | ACAATTTGCCCCCAGCGCTTCAG | ||
| Nucleoprotein 3 | F | GGGAGCCTTGAATACACCAAAA | |
| R | TGTAGCACGATTGCAGCATTG | ||
| P | ACATTGGCACCCGCAATCCTG | ||
| China | ORF1ab | F | CCCTGTGGGTTTTACACTTAA |
| R | ACGATTGTGCATCAGCTGA | ||
| P | CCGTCTGCGGTATGTGGAAAGGTTATGG | ||
| Nucleoprotein | F | GGGGAACTTCTCCTGCTAGAAT | |
| R | CAGACATTTTGCTCTCAAGCTG | ||
| P | TTGCTGCTGCTTGACAGATT | ||
| Germany | RNA-dependent RNA polymerase | F | GTGARATGGTCATGTGTGGCGG |
| R | CARATGTTAAASACACTATTAGCATA | ||
| P1 | CCAGGTGGAACRTCATCAGGTGATGC | ||
| P2 | CAGGTGGAACCTCATCAGGAGATGC | ||
| Envelope small membrane protein | F | ACAGGTACGTTAATAGTTAATAGCGT | |
| R | ATATTGCAGCAGTACGCACACA | ||
| P | ACACTAGCCATCCTTACTGCGCTTCG | ||
| Hong Kong | Orf1b | F | TGGGGCTTTACAGGTAACCT |
| R | AACACGCTTAACAAAGCACTC | ||
| P | TAGTTGTGATGCAATCATGACTAG | ||
| Nucleoprotein | F | TAATCAGACAAGGAACTGATTA | |
| R | CGAAGGTGTGACTTCCATG | ||
| P | GCAAATTGTGCAATTTGCGG | ||
| Thailand | Nucleoprotein | F | CGTTTGGTGGACCCTCAGAT |
| R | CCCCACTGCGTTCTCCATT | ||
| P | CAACTGGCAGTAACCA | ||
| France | RNA-dependent RNA polymerase IP2 | F | ATGAGCTTAGTCCTGTTG |
| R | CTCCCTTTGTTGTGTTGT | ||
| P | AGATGTCTTGTGCTGCCGGTA | ||
| RNA-dependent RNA polymerase IP4 | F | GGTAACTGGTATGATTTCG | |
| R | CTGGTCAAGGTTAATATAGG | ||
| P | TCATACAAACCACGCCAGG | ||
| Envelope small membrane protein | F | ACAGGTACGTTAATAGTTAATAGCGT | |
| R | ATATTGCAGCAGTACGCACACA | ||
| P | ACACTAGCCATCCTTACTGCGCTTCG | ||
| Japan | Nucleoprotein | F | AAATTTTGGGGACCAGGAAC |
| R | TGGCAGCTGTGTAGGTCAAC | ||
| P | ATGTCGCGCATTGGCATGGA |