Table 2.
Reference sequences and their amyloid propensity obtained by different bioinformatic methods, compared to IR microscopy ('Yes'—amyloid, 'No'—non-amyloid, 'Yes*'—oligomer).
| No | Sequence | IR microscopy | AmyloGram | FoldAmyloid | PASTA 2.0 | PATH (LR) | PATH (RF) | Consensus with IR (%) |
|---|---|---|---|---|---|---|---|---|
| 1 | FNPQGG | No | No | No | No | No | No | 100 |
| 2 | FTFIQF | Yes | Yes | Yes | No | Yes | Yes | 80 |
| 3 | ISFLIF | Yes | Yes | Yes | Yes | Yes | Yes | 100 |
| 4 | KPAESD | No | No | No | No | No | No | 100 |
| 5 | LVFYQQ | Yes | Yes | Yes | No | Yes | Yes | 80 |
| 6 | NPQGGY | No | No | No | No | No | No | 100 |
| 7 | SFLIFL | Yes* | Yes | Yes | Yes | Yes | Yes | 100 |
| 8 | TKPAES | No | No | No | No | No | No | 100 |
| 9 | YLLYYT | Yes | Yes | Yes | No | Yes | Yes | 80 |
| 10 | YTVIIE | Yes | Yes | Yes | Yes | No | Yes | 80 |