Table 5. Proteins of the Top 20 Differentially Expressed Phosphorylated Peptides.

All peptides are also TMT modified.

Gene	UniProt Accession	Protein	Peptide Position in Master Protein	Phosphorylations in Master Proteins (% localization probability if known)	Log2(AR HAP/LAP)
Increased in HAP vs LAP
Ank2	Q8C8R3	Ankyrin-2	1815–1823	2xPhospho [S1816(100); S1819(100)]	2.79
Nefh	P19246	Neurofilament heavy polypeptide	565–582	2xPhospho [S571(100); S577(100)]	1.75
Ank2	Q8C8R3	Ankyrin-2	3217–3235	3xPhospho [S3226(100); S3229(100); S3230(100)]	1.63
Ank2	Q8C8R3	Ankyrin-2	1812–1823	2xPhospho [S1816(100); S1819(100)]	1.14
Nefh	P19246	Neurofilament heavy polypeptide	559–576	2xPhospho [S565(100); S571(100)]	1.00
Mapt	A0A0A0MQC7	Microtubule-associated protein	57–72	1xPhospho [T58(99.7)]	0.98
Bicc1	G3X8S6	Bicaudal C homolog 1	807–819	1xPhospho [S814(50); S819(50)}	0.90
Sgip1	Q8VD37	SH3-containing GRB2-like protein 3-interacting protein 1	76–99	1xPhospho [S95(100)]	0.85
Bsn	O88737	Protein bassoon	2858–2874	1xPhospho [S2860(100)]	0.81
Mical3	Q8CJ19	Protein-methionine sulfoxide oxidase MICAL3	515–520	1xPhospho [S517(100)]	0.81
Decreased in HAP vs LAP
Ank2	Q8C8R3	Ankyrin-2	3763–3783	1xPhospho [S3781(91.5)]	−2.3
Wdr37	Q05BF4	WD repeat-containing protein 37	20–26	2xPhospho [S22(100); S24(100)]	−1.39
Dlg1	D3Z3B8	Disks large homolog 1	479–494	1xPhospho [S492(100)]	−1.39
Amph	A0A0G2JEG8	Amphiphysin	495–509	1xPhospho [S504(100)]	−1.28
Scg2	Q03517	Secretogranin-2	549–561	1xPhospho [S556(99.7)]	−1.21
Naxe	Q8K4Z3	NAD(P)H-hydrate epimerase	41–52	1xPhospho [T45(89.4)]	−1.12
Exoc7	O35250	Exocyst complex component 7	281–290	1xPhospho [S283(100)]	−1.1
Scg2	Q03517	Secretogranin-2	549–561	1xPhospho [S556(99.7)]	−1.04
Srsf10	Q3TFP0	Serine/arginine-rich-splicing factor 10	119–126	2xPhospho [S121(100); S123(100)]	−1.04
Tgoln1	Q62313	Trans-Golgi network integral membrane protein 1	126–160	3xPhospho [S130(0.6); S131(32.8); T132(32.8); T135(32.8)	−0.99

AR, Abundance Ratio.