TABLE 1.
H3 and H4 genome assembly and SNPs numbers.
Assembly information | H3 (MATα) | H4 (MATa) |
Illumina coverage* | 190.8x | 213.6x |
PacBio coverage* | 23.7x | 14.7x |
Final assembly | 16 chromosomes; mitochondrion; 2μ plasmid | 16 chromosomes and 1 PacBio unitig; mitochondrion; 2μ plasmid |
Nuclear genome | 11,930,681 bp | 11,932,493 bp |
Mitochondrion | 83,189 bp | 83,189 bp |
2μ plasmid | 6,119 bp | 6,119 bp |
CDSs | 5,732 | 5,748 |
Non-coding RNAs | 97 | 97 |
tRNAs | 298 | 298 |
Ty elements | 36 | 35 |
SNPs to H3 | N.A. | 0.93 SNPs/kb |
SNPs to H4 | 0.93 SNPs/kb | N.A. |
SNPs to JAY291 | 1.67 SNPs/kb | 1.61 SNPs/kb |
SNPs to S288C | 4.41 SNPs/kb | 4.43 SNPs/kb |
*Calculated with the exclusion of chromosome XII (repetitive rRNA cluster), the mitochondrial genome, and the 2μ plasmid.