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. 2021 Apr 12:bbab111. doi: 10.1093/bib/bbab111

Table 3.

Performance of RF model for family specific prediction of PPI modulators

PPI family model Testing Positives Negatives Sens Spec FPR Prec F1-Score MCC ROC AUC PRC AUC
Bromodomain_Histone 10-Fold CV 211 211 0.91 0.87 0.13 0.91 0.89 0.77 0.95 0.94
Testset 70 70 0.91 0.81 0.19 0.91 0.87 0.73 0.94 0.93
BCL2-Like_BAX/BAK 10-Fold CV 60 60 0.83 0.92 0.08 0.83 0.87 0.75 0.96 0.97
Testset 20 20 0.8 0.9 0.1 0.8 0.84 0.7 0.92 0.94
LEDGF_IN 10-Fold CV 58 58 0.93 0.84 0.16 0.93 0.89 0.78 0.96 0.97
Testset 20 20 0.85 0.85 0.15 0.85 0.85 0.7 0.97 0.97
LFA_ICAM 10-Fold CV 35 35 0.94 0.94 0.06 0.94 0.94 0.89 0.99 0.99
Testset 12 12 0.92 1 0 0.92 0.96 0.92 0.99 0.99
MDM2-Like_P53 10-Fold CV 73 73 0.88 0.93 0.07 0.88 0.9 0.81 0.97 0.97
Testset 24 24 0.88 0.92 0.08 0.88 0.89 0.79 0.93 0.96
RAS_SOS1 10-Fold CV 30 30 0.83 0.87 0.13 0.83 0.85 0.7 0.93 0.95
Testset 10 10 0.6 0.9 0.1 0.6 0.71 0.52 0.82 0.83
XIAP_Smac 10-Fold CV 58 58 0.98 0.95 0.05 0.98 0.97 0.93 0.98 0.97
Testset 19 19 0.95 0.95 0.05 0.95 0.95 0.89 0.97 0.96
RBD_hACE2 10-Fold CV 21 21 0.86 0.95 0.05 0.86 0.9 0.81 0.93 0.96
WDR5_MLL1 10-Fold CV 18 18 0.83 0.89 0.11 0.83 0.86 0.72 0.94 0.95
KEAP1_NRF2 10-Fold CV 18 18 0.78 0.89 0.11 0.78 0.82 0.67 0.93 0.94
CD4_gp120 10-Fold CV 26 26 0.96 0.96 0.04 0.96 0.96 0.92 0.99 0.99