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. 2021 Apr 29;11:9332. doi: 10.1038/s41598-021-88704-8

Table 1.

Location and samples ID of the of the crayfish species analyzed for Aphanomyces astaci haplotypes.

Location code Collection code Host species State Sample type DNA extraction Species ID (rRNA) Haplotype (rnnS/rnnL) GenBank rnnS GenBank rnnL
1 SA908-DEAD1 Procambarus hybus Mississippi Clinical sample CE19/01-1 Aphanomyces astaci a MW346522 MW346542
3 SA927-1 Cambarellus shufeldtii Mississippi Clinical sample CE19/06-12 Aphanomyces astaci usa6 MW346516 MW346536
SA927-5 Cambarellus shufeldtii Mississippi Clinical sample CE19/04-58 Aphanomyces astaci d2 MW346519 MW346539
SA927-8 Cambarellus shufeldtii Mississippi Clinical sample CE19/04-57 Aphanomyces astaci d2 MW346520 MW346540
SA927-16 Cambarellus shufeldtii Mississippi Clinical sample CE19/06-2 Aphanomyces astaci d2 MW346513 MW346533
SA927-18* Cambarellus shufeldtii Mississippi Clinical sample CE19/06-26 Aphanomyces astaci d2 MW346512 MW346532
SA927-23 Cambarellus shufeldtii Mississippi Clinical sample CE19/06-3 Aphanomyces astaci d2 MW346510 MW346530
SA927-25 Cambarellus shufeldtii Mississippi Clinical sample CE19/04-55 Aphanomyces astaci d2 MW346521 MW346541
SA927-27 Cambarellus shufeldtii Mississippi Clinical sample CE19/04-59 Aphanomyces astaci d2 MW346518 MW346538
SA927-18* Cambarellus shufeldtii Mississippi Culture CE19/C-136 Aphanomyces astaci d2 MW346494 MW346481
SA927-18* Cambarellus shufeldtii Mississippi Culture CE19/C-135 Aphanomyces astaci d2 MW346495 MW346482
SA927-18* Cambarellus shufeldtii Mississippi Culture CE19/C-127 Aphanomyces astaci d2 MW346498 MW346485
SA927-18* Cambarellus shufeldtii Mississippi Culture CE19/C-138 Aphanomyces astaci d2 MW346492 MW346479
SA927-14 Cambarellus shufeldtii Mississippi Culture CE19/C-140 Aphanomyces astaci d2 MW346491 MW346478
SA927-18* Cambarellus shufeldtii Mississippi Culture CE19/C-150 Aphanomyces astaci d2 MW346487 MW346474
4 SA928-7 Cambarellus shufeldtii Mississippi Clinical sample CE19/06-4 Aphanomyces astaci d2 MW346509 MW346529
6 SA930-2 Cambarellus shufeldtii Mississippi Clinical sample CE19/04-61 Aphanomyces astaci d2 MW346517 MW346537
SA930-4 Cambarellus shufeldtii Mississippi Clinical sample CE19/07-03 Aphanomyces astaci d2 MW346504 MW346524
SA930-6 Procambarus clarkii Mississippi Clinical sample CE19/06-15 Aphanomyces astaci usa6 MW346515 MW346535
SA930-8* Procambarus clarkii Mississippi Clinical sample CE19/07-08 Aphanomyces astaci d2 MW346503 MW346523
SA930-8* Procambarus clarkii Mississippi Culture CE19/C-141 Aphanomyces astaci d2 MW346490 MW346477
SA930-8* Procambarus clarkii Mississippi Culture CE19/C-128 Aphanomyces astaci d2 MW346497 MW346484
SA930-8 * Procambarus clarkii Mississippi Culture CE19/C-145 Aphanomyces astaci d2 MW346489 MW346476
7 M306-3 Procambarus clarkii Mississippi Clinical sample CE19/06-19 Aphanomyces astaci d2 MW346514 MW346534
9 SA937-5 Faxonius tricuspis Kentucky Clinical sample CE19/06-27 Aphanomyces astaci usa1 MW346511 MW346531
11 SA946-9 Procambarus ablusus Mississippi Clinical sample CE19/07-19 Aphanomyces astaci d2 MW346508 MW346528
SA946-23 Cambarus striatus Mississippi Clinical sample CE19/07-21 Aphanomyces astaci usa2 MW346507 MW346527
SA946-FAX SP JUV Faxonius sp. Mississippi Culture CE19/C-137 Aphanomyces astaci usa4 MW346493 MW346480
13 SA948-1 Procambarus acutus Mississippi Clinical sample CE19/07-23 Aphanomyces astaci a MW346506 MW346526
SA948-5 Faxonius etnieri Mississippi Clinical sample CE19/07-28 Aphanomyces astaci a MW346505 MW346525
23 SC32 MOLT 4* Procambarus raneyi South Carolina Culture CE19/C-130 Aphanomyces astaci usa3 MW346496 MW346483
SC32 MOLT 5* Procambarus raneyi South Carolina Culture CE19/C-147 Aphanomyces astaci usa5 MW346488 MW346475

North American crayfish species from each of the analyzed locations (Location code:1–30), including the corresponding collection codes, state, sample type (clinical sample/culture), DNA isolation code (CE19/), BLAST species ID, result of the mitochondrial rnnS/rnnL haplotype and GenBank references for the rnnS and rnnL regions. NA: not applicable. Each unique collection code refers to an individual crayfish. *Different pieces from the same molt.