TABLE 3.
Strain | Assembly level | Sequencing technology | Coverage | N50 (bp) | References |
L. fusiformis SAG 85.79 | Complete | Nanopore; Illumina | 114× | 6,423,694 | This study GCA_012516315.1 |
“Arthrospira sp.” TJSD092 | Complete | Illumina; PacBio | 190× | 6,434,389 | Genbank accession: GCA_003060805.1 |
“Arthrospira sp.” PCC 9108 | Complete | PacBio | 191× | 6,763,964 | Genbank accession: GCA_016745315.1 |
L. indica PCC 8005 | Chromosome | 454; Sanger | n/a | 1,412,831 | Janssen et al., 2010: GCA_000973065.1 |
Limnospira sp. BM01 | Chromosome | Illumina | 6.43× | 61,454 | Genbank accession: GCA_014250495.1 |
“A. platensis” NIES-39 | Chromosome | ABI 3730 | 11× | 619,347 | Fujisawa et al., 2010: GCA_000210375.1 |
“A. platensis” C1 | Chromosome | 454; Sanger | 28× | 206,210 | Cheevadhanarak et al., 2012: GCA_000307915.1 |
“A. platensis” YZ | Chromosome | ABI 3730; Illumina | 86× | 1,054,592 | Xu et al., 2016: GCA_001611905.1 |
Limnospira fusiformis KN | Scaffold | Illumina | 350× | 32,852 | Genbank accession: GCA_014489865.1 |
“A. maxima” CS-328 | Contig | n/a | n/a | 92,573 | Carrieri et al., 2011: GCA_000173555.1 |
“A. platensis” NIES-46 | Contig | MiSeq | 42× | 40,752 | Suzuki et al., 2019: GCA_009176225.1 |
A. platensis Paraca | Contig | Illumina | 36× | 72,660 | Lefort et al., 2014: GCA_000175415.3 |
“Arthrospira sp.” TJSD091 | Contig | Illumina | 130× | 49,578 | Dong et al., 2015: GCA_000974245.1 |
“A. platensis” O9.13F | Contig | Illumina | 20× | 6,514 | Genbank accession: GCA_003268325.1 |
“A. platensis” FACHB-971 | Contig | Illumina | 50× | 39,263 | Genbank accession: GCA_014698385.1 |
“A. platensis” FACHB-439 | Contig | Illumina | 50× | 44,370 | Genbank accession: GCA_014698675.1 |
“A. platensis” FACHB-835 | Contig | Illumina | 50× | 34,814 | Genbank accession: GCA_014698815.1 |
Arthrospira sp. PLM2.Bin9 | Contig | Illumina | 18× | 36,014 | Genbank accession: GCA_007732545.1 |
Assembly level as described previously (Kitts et al., 2016).