TABLE 1.
Genome data and accession numbers for the P. cannabina pv. alisalensis and P. syringae pv. maculicola strains
| Genome information |
PGAPa annotation |
Completeness checkb |
||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Pathogen | Strain | Sequence status | Genome structure | GenBank accession no. (assembly no.) | Genome size (bp) | G+C content (mol%) | No. of contigs | Genome coverage (×) | N50 (bp) | Total no. of genes | No. of rRNAs | No. of tRNAs | Com (%) | Con (%) |
| Pseudomonas cannabina pv. alisalensis | MAFF 301419 | Complete genome sequence | 1 chromosome, 1 plasmid | CP067022, CP067023 (GCF_016599635.1) | 6,144,893 | 58.7 | 2 | 247 | 6,103,677 | 5,486 | 17 | 64 | 100 | 0.22 |
| Pseudomonas cannabina pv. alisalensis | MAFF 106156 | Draft genome sequence | Undetermined | JAEVFO000000000 | 6,253,010 | 57.4 | 211 | 260 | 109,379 | 5,741 | 12 | 57 | 100 | 0.61 |
| Pseudomonas syringae pv. maculicola | MAFF 302723 | Complete genome sequence | 1 chromosome, 2 plasmids | CP067024, CP067025, CP067026 (GCF_016599655.1) | 6,419,483 | 58.3 | 3 | 323 | 6,349,611 | 5,788 | 16 | 64 | 100 | 0.38 |
| Pseudomonas syringae pv. maculicola | SUPP 2206 | Draft genome sequence | Undetermined | JAEVFP000000000 | 6,439,699 | 55.9 | 231 | 256 | 68,797 | 5,981 | 8 | 60 | 100 | 0.51 |
a
PGAP, NCBI Prokaryotic Genome Annotation Pipeline.
b
The completeness check was performed using CheckM. Com, completeness; con, contamination.