Table 2.
Different types of explorable modalities available in the ‘Explore’ tab of the IBDDB
| Tab | Details |
|---|---|
| aInflammatory Bowel Disease (IBD) Database | Curated database of 289 gene, contains 34 columns (concepts) |
| Knowledgebase | To explore the IBD-related titles and citations from PubMed literature. This includes sentences extracted from the literature, which show link to IBD |
| Biomedical entities | To explore biomedical entities linked to IBD by providing information about linked dictionary, frequency in the literature and the link to PubMed literature |
| Biomedical entities co-occurrence | Helps user to explore co-occurrence of biomedical entities linked to IBD. It allows to find co-mention of two entities in the published literature by selecting any two dictionaries (out of 11 listed). The relevant PubMed articles can also be retrieved for further exploration |
| Hypothesis explorer | Hypotheses explorer allows to identify new association among selected terms selected from different dictionaries (A–B and B–C are known and A–C are suggested links between biomedical entities) |