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. 2021 Mar 23;28(2):dsab002. doi: 10.1093/dnares/dsab002

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© The Author(s) 2021. Published by Oxford University Press on behalf of Kazusa DNA Research Institute.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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(A) GenomeScope2 k-mer (25 and 31) distribution displaying estimation of genome size (len), homozygosity (aa), heterozygosity (ab), mean k-mer coverage for heterozygous bases (kcov), read error rate (err), the average rate of read duplications (dup), k-mer size used on the run (k:), and ploidy (p:). (B) Margaritifera margaritifera genome assembly assessment using KAT comp tool to compare the Illumina PE k-mer content within the genome assembly. Different colours represent the read k-mer frequency in the assembly.