Figure 5.

Prediction of immune epitopes of the novel HPeCV-26. Various predicted epitopes in the Cap protein are indicated by different colors. Amino acid sites 14 (Arg, epitope probability = 0.58), 56 (Ala, epitope probability = 0.53), and 59 (Gln, epitope probability = 0.58) are indicated in red (C-score = −1.60). The confidence for this model was quantitatively measured using the C-score, which was calculated based on the significance of threading template alignments and the converged parameters in the structure assembly simulations. The C-score is typically in the range of [-5, 2] and a higher value indicates a model with a higher confidence and vice versa.