TABLE 2.
WGS characteristics for all study isolates
| Isolate ID | Total length (bp) | Total no. of contigs | N50 | GC content | No. of ORFs | Coding density per Mb | Completeness (%)a | Contamination (%)a | Fold coverage | NCBI accession no. |
|---|---|---|---|---|---|---|---|---|---|---|
| 4A7 | 4,384,099 | 63 | 200,315 | 0.65 | 3,833 | 874.30 | 99.57 | 0.43 | 176.78 | GCA_013523165.1 |
| 6C6 | 4,766,710 | 114 | 97,492 | 0.64 | 4,252 | 892.02 | 99.25 | 0.48 | 81.15 | GCA_013523125.1 |
| 8A1 | 4,387,320 | 22 | 658,584 | 0.63 | 4,011 | 914.23 | 98.85 | 0.23 | 137.94 | GCA_013523115.1 |
| 10A6 | 5,011,469 | 74 | 143,141 | 0.66 | 4,582 | 914.30 | 98.28 | 0.51 | 106.98 | GCA_013523075.1 |
| 20A1 | 5,957,387 | 67 | 216,552 | 0.61 | 5,427 | 910.97 | 100 | 0.96 | 112.32 | GCA_013523055.1 |
| 31A8 | 4,933,281 | 64 | 140,977 | 0.62 | 4,472 | 906.50 | 100 | 0.14 | 150.84 | GCA_013523065.1 |
| 34A1 | 5,218,387 | 41 | 227,787 | 0.62 | 4,714 | 903.34 | 100 | 0.22 | 139.09 | GCA_013523035.1 |
| 39A1 | 5,149,393 | 73 | 212,731 | 0.66 | 4,756 | 923.60 | 98.28 | 0.59 | 125.36 | GCA_013523015.1 |
| 45C2 | 5,744,003 | 48 | 430,146 | 0.59 | 4,990 | 868.73 | 100 | 0.41 | 102.52 | GCA_013522975.1 |
| 56A10 | 5,310,052 | 73 | 162,085 | 0.61 | 4,863 | 915.81 | 100 | 0.91 | 125.39 | GCA_013522955.1 |
| 57B2 | 4,762,958 | 48 | 303,991 | 0.61 | 4,386 | 920.86 | 100 | 0.53 | 145.27 | GCA_013522965.1 |
| 62A4 | 4,274,196 | 38 | 216,335 | 0.63 | 3,939 | 921.58 | 99.17 | 0.18 | 156.81 | GCA_013522915.1 |
| 66C3 | 5,433,829 | 45 | 322,747 | 0.62 | 4,913 | 904.15 | 98.72 | 1.19 | 123.42 | GCA_013522925.1 |
| 69C1 | 4,420,499 | 19 | 530,907 | 0.64 | 4,134 | 935.19 | 99.89 | 0.08 | 121.17 | GCA_013522875.1 |
| 82B1 | 5,269,094 | 85 | 131,046 | 0.61 | 4,759 | 903.19 | 100 | 1.1 | 103.55 | GCA_013522865.1 |
| 88B1 | 5,221,008 | 57 | 191,778 | 0.62 | 4,737 | 907.30 | 100 | 0.22 | 121.01 | GCA_013522855.1 |
| 89C1 | 5,608,481 | 27 | 532,420 | 0.55 | 5,318 | 948.21 | 99.04 | 1.04 | 168.02 | GCA_013522795.1 |
| 95A6 | 4,993,631 | 108 | 114,700 | 0.62 | 4,672 | 935.59 | 98.53 | 3.42 | 150.17 | GCA_013522825.1 |
| 96A1 | 6,346,948 | 71 | 157,681 | 0.6 | 5,694 | 897.12 | 100 | 0.24 | 80.21 | GCA_013522805.1 |
| 97C1 | 5,024,421 | 37 | 364,598 | 0.66 | 4,597 | 914.93 | 98.6 | 0.61 | 143.27 | GCA_013522775.1 |
| 99A1 | 4,929,078 | 33 | 548,892 | 0.61 | 4,613 | 935.87 | 99.28 | 1.04 | 108.41 | GCA_013522755.1 |
| 109A1 | 5,134,915 | 194 | 194,981 | 0.63 | 4,812 | 937.11 | 99.89 | 2.52 | 113.41 | GCA_013522695.1 |
| 114A4 | 5,725,822 | 84 | 125,350 | 0.61 | 5,210 | 909.91 | 100 | 0.08 | 149.02 | GCA_013522705.1 |
| 115A1 | 4,824,973 | 29 | 381,757 | 0.63 | 4,430 | 918.14 | 98.96 | 0.65 | 124.02 | GCA_013522725.1 |
| 119A3 | 5,260,717 | 42 | 292,402 | 0.62 | 4,749 | 902.73 | 98.72 | 1.19 | 97.81 | GCA_013522655.1 |
| HS1 | 6,514,732 | 85 | 187,275 | 0.6 | 5,907 | 906.71 | 100 | 0.22 | 141.47 | GCA_013522665.1 |
| HS2 | 6,508,831 | 99 | 184,619 | 0.6 | 5,903 | 906.92 | 100 | 0.88 | 83.64 | GCA_013522615.1 |
| HS3 | 6,888,403 | 121 | 160,961 | 0.66 | 6,365 | 924.02 | 99.68 | 0.13 | 128.79 | GCA_013522595.1 |
| HS4 | 6,878,130 | 131 | 129,918 | 0.66 | 6,426 | 934.27 | 99.68 | 0.4 | 55.57 | GCA_013522575.1 |
| HS5 | 6,415,930 | 123 | 170,289 | 0.61 | 5,971 | 930.65 | 100 | 0.25 | 122.29 | GCA_013522605.1 |
a
CheckM estimate.