TABLE 1.
Virus |
Genome features |
Capsid features |
|||||
---|---|---|---|---|---|---|---|
Family | Member | No. genome segments | Size (kbp)c | Length (μm)d | CSP (aa’s) | Φe/irf (nm) | Genome density (bp/100 nm3)g |
Herpesviridae | HCMVb | 1 | 200 | 68 | 1,370 | 130/45 | 38 |
Reoviridae | Cypovirus | 10 | 31.4 | 8.79 | 1,333 | 58/24 | 54 |
Aquareovirus, GCRV | 11 | 23.6 | 6.63 | 1,027 | 60/23 | 46 | |
Orbivirus, BTV | 10 | 19.2 | 5.4 | 901 | 52/22 | 43 | |
Rotavirus | 11 | 18.5 | 5.18 | 880 | 52/23.5 | 34 | |
Cystoviridae | Phage Φ6 | 3 | 13.4 | 3.77 | 769 | 50/20 | 40 |
Totiviridae | TVV2 | 1 | 4.65 | 1.31 | 709 | 43/18 | 19 |
ScV-L-A | 1 | 4.6 | 1.29 | 680 | 43/17 | 21 | |
Picobirnaviridae | 2 | 4.2 | 1.18 | 590 | 35/14 | 36 | |
Partitiviridae | PsV-Sh | 1(2)i | 1.7/3.3 | 0.477 | 420 | 35/12 | 23 |
Chrysoviridae | PcVh | 1(4)i | 3.2/12.6 | 0.899 | 109 | 40/16 | 19 |
Quadriviridae | RnQV1 | 1–2(4) | 4.3/17.1 | 1.21 | 1,356 + 1,061 | 4,716 | 25 (50)j |
Table adapted with data from Luque et al. (36).
Human Cytomegalovirus, a dsDNA virus, a lineage lacking genome segmentation, and characterized with B-from dsDNA.
Approximate genome length.
Genome length calculated on rise/bp of 2.81 Å for dsRNa and 3.4 Å for dsDNA.
Approximate outer diameter.
Approximate inner radius.
Genome density when capsid cavity is assumed to be a perfect sphere containing only nucleic acids.
PsV-S, penicillium stoloniferum virus S; PcV, penicillium chrysogenum virus.
PsV-S and PcV have genomes formed of 2 and 4 segments, respectively.
Density value of 25 if there is 1 dsRNA molecule per particle or 50 if there are 2 dsRNA molecules per particle.