TABLE 1.
K type | A. baumannii strains with confirmed CPS structure | K locus GenBank accession no. or coordinates within whole-genome shotgun sequences | Reference or source |
---|---|---|---|
1 | AYE | CU459141 (base position range, 3834156–3863316) | 10 |
2 | ACICU | CP000863 (base position range, 88768–115030) | 10, 11, 18 |
3/22a | ATCC 17978/LUH5537 | CP000521 (base position range, 56835–79908)/ KC526920 | 10, 20/11, 20 |
6 | RBH4 | KF130871 | 46 |
7 | LUH5533 | KC526894 | 11, 47 |
8 | BAL097 | KX712116 | 48 |
9 | B05 | MK331712 | 9 |
11 | LUH5545 | KC526904 | 11, 49 |
15 | LUH5554 | KC526900 | 11, 50 |
16 | D4 | MF522813 | 51 |
17 | G7 | KC118541 | 52 |
19 | 28 | KU215659 | 53 |
20 | A388 | JQ684178 | 54 |
21 | G21 | MG231275 | 54 |
24 | RCH51 | KX756650 | 44 |
25 | AB5075 | BK008886 | 55 |
27 | 4190 | KT266827 | 21 |
30 | NIPH190 | MN166189 | 22 |
32 | LUH5549 | KC526897 | 11, 19 |
33 | NIPH67 | MN166195 | 56 |
35 | LUH5535 | KC526896 | 50 |
37 | NIPH146 | APOU01000009 (base position range, 32574–53092) | 20 |
42 | LUH5550 | KC526903 | 57 |
43 | LUH5544 | KC526905 | 11, 58 |
44 | NIPH70 | APRC01000043 (base position range, 97989–129118) | 21 |
45 | NIPH201 | MN166190 | 22 |
46 | NIPH329 | MK609549 | 59 |
47 | NIPH601 | MN166193 | 58 |
48 | NIPH615 | MN166191 | 22 |
51 | WM98b | MN148384 | Unpublished |
52 | LUH5546 | KC526899 | 11 |
53 | D23 | MH190222 | 60 |
54 | RCH52 | MG867726 | 48 |
55 | BAL204 | MN148381 | 61 |
57 | BAL212 | KY434631 | 62 |
58 | BAL114 | KT359617 | Unpublished |
61 | NL4 | To be registered | J. Kenyon, personal communication |
73 | SGH0703 | MF362178 | 63, 64 |
74 | BAL309 | MN148383 | 61 |
80 | LUH3712 | KC526914 | 11, 44 |
81 | LUH3713 | KC526916 | 11 |
82 | LUH5534 | KC526908 | 11, 65 |
83 | LUH5538 | KC526898 | 11, 49 |
84 | LUH5540 | KC526902 | 11 |
85 | LUH5543 | KC526913 | 61 |
87 | LUH5547 | KC526918 | 11; this research |
88 | LUH5548 | KC526910 | 11, 58 |
89 | LUH5552 | KC526919 | 11; this research |
90 | LUH5553 | KC526917 | 11 |
91 | 1053 | KM402814 | 66 |
92 | B8300 | CP021347 (base position range, 1420707–1451977) | Unpublished |
93 | B11911 | BK010902 | 23 |
116 | MAR-303 | MK399425 | 24 |
125 | MAR13-1452 | MH306195 | 67 |
128 | KZ-1093 | MK399428 | 68 |
These KL clusters are closely related, although they are slightly different at the nucleotide level, but produce CPSs with identical structures.