Table 1.
Specimens used in phylogenetic analysis and their GenBank accession numbers. The newly generated sequences are shown in bold.
| Species | Voucher | Locality | GenBank accession number | |||||
|---|---|---|---|---|---|---|---|---|
| ITS | nrLSU | rpb2 | rpb1 | tef1-α | atp6 | |||
| Acantholichen pannarioides | MDF352 | Costa Rica | KT429795 | KT429807 | KT429817 | |||
| Acantholichen campestris | DIC595b | Brazil | KT429798 | KT429810 | KT429818 | |||
| Acantholichen galapagoensis | MDF058 | Ecuador | KT429785 | KT429800 | KT429812 | |||
| Ampulloclitocybe clavipes | KUN-HKAS 54426 | China: Jilin | MW616462 | MW600481 | MW656471 | MW656467 | MW656461 | MW656478 |
| AFTOL-ID 542 | AY789080 | AY639881 | AY780937 | AY788848 | AY881022 | |||
| DJL06TN40 | USA | FJ596912 | KF381542 | KF407938 | ||||
| Arrhenia auriscalpium | TUB 011588 | DQ071732 | ||||||
| Arrhenia acerosa | Lueck2 | Germany | KP965766 | KP965784 | ||||
| Cantharellula umbonata | CBS 398.79 | France | MH861222 | MH872990 | ||||
| Cantharocybe gruberi | AFTOL-ID 1017 | USA | DQ200927 | DQ234540 | DQ385879 | DQ435808 | DQ059045 | |
| AH24539 | Spain | JN006422 | JN006420 | |||||
| Cantharocybe brunneovelutina | DJL-BZ-1883 | Belize | NR160458 | NG068731 | ||||
| Cantharocybe virosa | TENN63483 | India | KX452405 | JX101471 | ||||
| Iqbal-568 | Bangladesh | KX452403 | KF303143 | |||||
| Chromosera cyanophylla | AFTOL-ID 1684 | USA | DQ486688 | DQ457655 | KF381509 | |||
| Chromosera ambigua | GE18008-1 | France | MK645573 | MK645587 | MK645593 | |||
| Chromosera lilacina | GE18035 | Canada | MK645577 | MK645591 | MK645597 | |||
| Chromosera xanthochroa | GE18033 | Canada | MK645576 | MK645590 | MK645596 | |||
| Chrysomphalina chrysophylla | AFTOL-ID 1523 | USA | DQ192180 | DQ457656 | ||||
| Chrysomphalina grossula | OSC 113683 | EU644704 | EU652373 | |||||
| Clitocybe aff. costata | DJL06TN80 | USA | FJ596913 | |||||
| Clitocybe herbarum | G0171 | Hungary | MK277719 | |||||
| Clitocybe trulliformis | 14562 | Italy | JF907809 | |||||
| 4804 | Russia | MH930178 | ||||||
| Clitocybe cf. trulliformis | G0460 | Hungary | MK277728 | |||||
| Clitocybe sp. | NAMA 2015-206 | USA | MH910535 | |||||
| Clitocybe sp. | NAMA 2015-318 | USA | MH910563 | |||||
| Clitocybe sp. | Mushroom Observer 302917 | USA | MK607556 | |||||
| Cora pavonia | DIC215 | Ecuador | KF443238 | KF443261 | KF443275 | |||
| Cora aspera | DIC110 | Bolivia | KF443230 | KF443257 | KF443267 | |||
| Cora reticulifera | DIC119 | Ecuador | KF443239 | KF443262 | KF443269 | |||
| Cora squamiformis | DIC146 | Bolivia | KF443240 | KF443263 | KF443273 | |||
| Corella brasiliensis | MDF017 | Bolivia | KF443229 | KF443255 | KF443276 | |||
| Corella aff. Melvinii | MDF200 | Brazil | KJ780569 | KY861725 | ||||
| Cuphophyllus pratensis | Lueck7 | Germany | KP965771 | KP965789 | ||||
| DJL-Scot-8 | UK | KF291057 | KF291058 | |||||
| Cuphophyllus aurantius | CFMR PR-6601 | Puerto Rico | KF291099 | KF291100 | KF291102 | |||
| Cuphophyllus aff. pratensis | AFTOL-ID 1682 | USA | DQ486683 | DQ457650 | DQ435804 | |||
| Cuphophyllus sp. | KUN-HKAS 105671 | China: Tibet | MW762875 | MW763000 | MW789179 | MW789163 | ||
| Cyphellostereum galapagoense | CDS 41163 | Ecuador | NR158415 | NG068806 | ||||
| Cyphellostereum imperfectum | DIC115 | Guatemala | KF443218 | KF443243 | KF443277 | |||
| Dictyonema interruptum | Ertz 10475 | Portugal | EU825967 | KF443282 | ||||
| Dictyonema schenckianum | DIC113 | Brazil | KF443225 | KF443251 | KF443285 | |||
| Eonema pyriforme | G1063 | Poland | MK278075 | |||||
| Gliophorus psittacinus | CFMR DEN-25 | Denmark | KF291075 | KF291076 | KF291078 | |||
| Gliophorus graminicolor | TJB-10048 (CORT) | Australia | KF381520 | KF381545 | KF407936 | |||
| Gliophorus aff. laetus | CFMR PR-5408 | Puerto Rico | KF291069 | KF291070 | ||||
| Gloioxanthomyces nitidus | GDGM41710 | China: Jilin | MG712283 | MG712282 | MG711911 | |||
| Haasiella splendidissima | Herb. Roux n. 4044 | France | JN944400 | JN944401 | ||||
| Herb. Roux n. 3666 | Moldova | JN944398 | JN944399 | |||||
| Haasiella venustissima | A. Gminder 971488 | Italy | KF291092 | KF291093 | ||||
| E. C. 08191 | Italy | JN944393 | JN944394 | |||||
| Humidicutis marginata | JM96/33 | AF042580 | ||||||
| Humidicutis auratocephalus | AFTOL-ID 1727 | USA | DQ490624 | DQ457672 | DQ472720 | DQ447906 | ||
| Humidicutis dictiocephala | QCAM6000 | Ecuador | KY689661 | KY780120 | ||||
| Humidicutis sp. | CFMR BZ-3923 | Belize | KF291110 | KF291111 | ||||
| Hygroaster nodulisporus | AFTOL-ID 2020 | USA | EF561625 | |||||
| Hygroaster albellus | AFTOL-ID 1997 | Puerto Rico | KF381521 | EF551314 | ||||
| Hygrocybe conica | FO 46714 | DQ071739 | ||||||
| Hygrocybe cf. acutoconica | CFMR NC-256 | USA | KF291117 | KF291118 | KF291120 | |||
| Hygrocybe coccinea | AFTOL-ID 1715 | USA | DQ490629 | DQ457676 | DQ472723 | DQ447910 | GU187705 | |
| Hygrocybe aff. conica | AFTOL-ID 729 | AY854074 | AY684167 | AY803747 | ||||
| Hygrophorus eburneus | US97/138 | Germany | AF430279 | |||||
| GDGM70059 | USA | MT093608 | ||||||
| Hygrophorus chrysodon | KUN-HKAS 82501 | China: Tibet | MW616463 | MW600482 | MW656472 | MW656462 | MW656479 | |
| KUN-HKAS 112569 | China: Tibet | MW762876 | MW763001 | MW789180 | MW789164 | MW773440 | MW789195 | |
| Hygrophorus flavodiscus | KUN-HKAS 68013 | China: Yunnan | MW616464 | MW600483 | MW656473 | MW656468 | MW656463 | MW656480 |
| KUN-HKAS 55043 | China: Yunnan | MW616465 | MW600484 | MW656474 | MW656469 | MW656464 | MW656481 | |
| Hygrophorus gliocyclus | KUN-HKAS 79929 | China: Tibet | MW616466 | MW600485 | MW656475 | MW656465 | MW656482 | |
| Hygrophorus hypothejus | KUN-HKAS 56550 | Germany | MW616467 | MW600486 | MW656476 | MW656470 | MW656483 | |
| Hygrophorus pudorinus | AFTOL-ID 1723 | USA | DQ490631 | DQ457678 | DQ472725 | DQ447912 | GU187710 | |
| Hygrophorus sp. 1 | KUN-HKAS 112566 | China: Yunnan | MW762877 | MW763002 | MW789181 | MW789165 | MW773441 | MW789196 |
| Hygrophorus sp. 2 | KUN-HKAS 87261 | China: Jilin | MW616468 | MW600487 | MW656477 | MW656466 | MW656484 | |
| Hygrophorus sp. 3 | KUN-HKAS 112567 | China: Tibet | MW762878 | MW763003 | MW789182 | MW789166 | MW773442 | MW789197 |
| Hygrophorus sp. 4 | KUN-HKAS 112568 | China: Tibet | MW762879 | MW763004 | MW789183 | MW789167 | MW773443 | MW789198 |
| Lichenomphalia hudsoniana | GAL18249 | USA | JQ065873 | JQ065875 | ||||
| Lichenomphalia meridionalis | S-270-FB1 | Japan | LC428308 | LC428307 | ||||
| Neohygrocybe ovina | GWG H. ovina Rhosisaf (ABS) | UK | KF291233 | KF291234 | KF291236 | |||
| Neohygrocybe griseonigra | GDGM 44492 | China | MG779451 | MG786565 | ||||
| Neohygrocybe ingrata | DJL05TN62 (TENN) | USA | KF381525 | KF381558 | KF381516 | |||
| Neohygrocybe subovina | GRSM 77065 | USA | KF291140 | KF291141 | ||||
| Spodocybe bispora | KUN-HKAS 73310 | China: Yunnan | MW762880 | MW763005 | MW789184 | MW789168 | MW773444 | MW789199 |
| KUN-HKAS 73332 | China: Yunnan | MW762881 | MW763006 | MW789185 | MW789169 | MW773445 | MW789200 | |
| KUN-HKAS 112564 | China: Yunnan | MW762882 | MW763007 | MW789186 | MW789170 | MW773446 | MW789201 | |
| Spodocybe rugosiceps | KUN-HKAS 112561 | China: Yunnan | MW762883 | MW763008 | MW789187 | MW789171 | MW773447 | MW789202 |
| KUN-HKAS 81981 | China: Yunnan | MW762884 | MW763009 | MW789188 | MW789172 | MW789203 | ||
| KUN-HKAS 69830 | China: Yunnan | MW762885 | MW763010 | MW789189 | MW789173 | MW773448 | MW789204 | |
| Spodocybe rugosiceps | KUN-HKAS 71071 | China: Yunnan | MW762886 | MW763011 | MW789190 | MW789174 | MW773449 | MW789205 |
| KUN-HKAS 112562 | China: Yunnan | MW762887 | MW763012 | MW789191 | MW789175 | MW789159 | MW789206 | |
| KUN-HKAS 112563 | China: Yunnan | MW762888 | MW763013 | MW789192 | MW789176 | MW789160 | MW789207 | |
| Spodocybe sp. 1 | KUN-HKAS 112560 | China: Jilin | MW762889 | MW763014 | MW789193 | MW789177 | MW789161 | MW789208 |
| Spodocybe sp. 2 | KUN-HKAS 112565 | China: Yunnan | MW762890 | MW763015 | MW789194 | MW789178 | MW789162 | MW789209 |
| Porpolomopsis calyptriformis | CFMR ENG-3 | UK | KF291242 | KF291243 | KF291245 | |||
| Porpolomopsis aff. calyptriformis | DJL05TN80 (TENN) | USA | KF291246 | KF291247 | KF291249 | |||
| Porpolomopsis lewelliniae | TJB-10034 (CORT) | Thailand | KF291238 | KF291239 | KF291241 | |||
| Pseudoarmillariella ectypoides | AFTOL-ID 1557 | USA | DQ192175 | DQ154111 | DQ474127 | DQ516076 | GU187733 | |
| Pseudoarmillariella bacillaris | KUN-HKAS 76377 | China | KC222315 | KC222316 | ||||
| Sinohygrocybe tomentosipes | GDGM 50075 | China: Hunan | MG685873 | MG696902 | MG696906 | |||
| GDGM 43351 | China: Sichuan | MG685872 | MG696901 | MG696905 | ||||
| Amylocorticium cebennense | CFMR HHB-2808 | USA | GU187505 | GU187561 | GU187770 | GU187439 | GU187675 | |
| Aphroditeola olida | DAOM 226047 | Canada | KF381518 | KF381541 | ||||
| Macrotyphula fistulosa | IO. 14. 214 | Spain | MT232352 | KY224088 | MT242317 | MT242354 | ||
| Macrotyphula juncea | IO. 14. 177 | Sweden | MT232353 | MT232306 | MT242337 | MT242355 | ||
| Macrotyphula phacorrhiza | IO. 14. 167 | Sweden | MT232364 | MT232315 | MT242348 | MT242326 | MT242367 | |
| IO.14. 200 | France | MT232363 | MT232314 | MT242347 | MT242366 | |||
| Phyllotopsis nidulans | IO. 14. 196 | Spain | MT232308 | MT242338 | MT242319 | MT242357 | ||
| Phyllotopsis sp. | AFTOL-ID 773 | DQ404382 | AY684161 | AY786061 | DQ447933 | DQ059047 | ||
| Pleurocybella porrigens | UPS F-611822 | Sweden | MT232355 | MT232309 | MT242339 | |||
| Plicaturopsis crispa | AFTOL-ID 1924 | USA | DQ494686 | DQ470820 | GU187816 | |||
| Pterulicium echo | ZRL20151311 | LT716065 | KY418881 | KY419026 | KY418979 | KY419076 | ||
| Pterulicium gracilis | IO. 14. 142 | Sweden | MT232356 | MT232310 | MT242358 | |||
| Sarcomyxa serotina | AFTOL-ID 536 | USA | DQ494695 | AY691887 | DQ859892 | DQ447938 | GU187754 | |
| Serpulomyces borealis | CFMR L-8014 | USA | GU187512 | GU187570 | GU187782 | GU187686 | ||
| Tricholomopsis decora | AFTOL-ID 537 | DQ404384 | AY691888 | DQ408112 | DQ447943 | DQ029195 | ||
| Tricholomopsis osiliensis | ZRL20151760 | LT716068 | KY418884 | KY419029 | KY419079 | |||
| Typhula capitata | IO. 15. 122 | Spain | MT232357 | MT232312 | MT242341 | MT242321 | MT242360 | |
| Typhula incarnata | IO. 14. 92 | Sweden | MT232362 | MT232313 | MT242346 | MT242325 | ||
| Typhula micans | IO. 14. 165 | Sweden | MT232361 | KY224102 | MT242345 | MT242324 | MT242364 | |