TABLE 5.
Performance comparisons of iAMP-RAAC and RF (Chung et al., 2019) on training set in DS2 in the seven different AMP functional activities based on 10-fold cross-validation.
| Activity | Method | SN (%) | SP (%) | ACC (%) | MCC (%) |
| Anti-parasitic | iAMP-RAAC | 50.00 | 96.43 | 88.69 | 54.65 |
| RF | 75.26 | 83.66 | 82.02 | 49.55 | |
| Anti-viral | iAMP-RAAC | 88.21 | 94.70 | 92.34 | 83.41 |
| RF | 91.09 | 93.24 | 92.47 | 83.82 | |
| Anti-cancer | iAMP-RAAC | 52.12 | 97.99 | 90.34 | 61.19 |
| RF | 76.73 | 78.88 | 78.55 | 45.07 | |
| Targeting mammals | iAMP-RAAC | 69.72 | 96.93 | 92.40 | 71.20 |
| RF | 86.77 | 88.93 | 88.53 | 66.20 | |
| Anti-fungal | iAMP-RAAC | 91.27 | 78.58 | 86.23 | 71.04 |
| RF | 85.73 | 85.53 | 85.65 | 70.50 | |
| TGPB | iAMP-RAAC | 89.90 | 88.61 | 89.31 | 78.51 |
| RF | 88.52 | 88.48 | 88.51 | 76.87 | |
| TGNB | iAMP-RAAC | 90.58 | 87.83 | 89.32 | 78.50 |
| RF | 88.05 | 88.15 | 88.09 | 76.06 |