Table 1:
Algorithms for aligning multi-omic single-cell data.
| Name | Year | Approach | Problem | Supervised |
|---|---|---|---|---|
| JLMA [15] | 2011 | Eigenvalue decomposition on joint Laplacian | Embedding | No |
| GUMA [6] | 2014 | Optimize geometry matching and feature matching | Matching | No |
| MATCHER [16] | 2015 | Gaussian process to 1D trajectory | Embedding | No |
| MAGAN [1] | 2018 | Generative adversarial network | Matching | Yes |
| LIGER [17] | 2019 | Non-negative matrix factorization | Embedding | Yes |
| Seurat v3 [13] | 2019 | Canonical correlation analysis | Embedding | Yes |
| MMD-MA [9] | 2019 | Optimize maximum mean discrepancy | Embedding | No |
| UnionCom [3] | 2020 | Optimize geometry matching and global scaling | Embedding | No |