Skip to main content
. Author manuscript; available in PMC: 2021 May 4.
Published in final edited form as: Cell Rep. 2021 Apr 6;35(1):108954. doi: 10.1016/j.celrep.2021.108954

Table 1.

In vivo datasets analyzed via SGPMD-NMF

Brain region Cell type Reporter Imaging modality Reference
Mouse cortex L1 (Figure 3) interneurons (Ndnf+) Voltron + patch clamp wide-field epifluorescence reporter: Abdelfattah et al., 2019
data: this work
Mouse hippocampus CA1
(Figure 4)
oriens interneurons paQuasAr3-s micromirror-based, soma-targeted, structured illumination data: Adam et al., 2019
Mouse hippocampus CA1
(Figures 4 and 5; Video S1)
pyramidal cells SomArchon1 micromirror-based, soma-targeted, structured illumination reporter: Piatkevich et al., 2019
data from setup: Adam et al., 2019
Mouse cortex L1
(Figure 6; Videos S2 and S5)
interneurons (Ndnf+) Voltron wide-field epifluorescence data: Abdelfattah et al., 2019
Mouse cortex L1
(Figure S1; Video S3)
interneurons (5-HT3AR+) SomArchon1 holographic peripheral membrane-targeted structured illumination data: Fan et al., 2020
Zebrafish spinal cord
(Figure S2; Video S4)
excitatory (Vglut2a+) zArchon1 light sheet transgenics: this work reporter: Piatkevich et al., 2018

Diverse datasets included different species (mouse and zebrafish), regions of the central nervous system (hippocampus, cortex, and spinal cord), reporters (paQuasAr3-s, SomArchon1, zArchon1, and Voltron), and imaging modalities (structured illumination, holographic, wide-field epifluorescence, and light sheet). See also Figures S1 and S2 and Videos S1, S2, S3, S4, and S5.