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. 2021 Apr 13;49(8):4294–4307. doi: 10.1093/nar/gkab250

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© The Author(s) 2021. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 5. — SHAPELoop identifies kissing loops in the musD transport element (MTE) and its mutants. Shown are loops and their SHAPE reactivities in wild-type MTE (A) and its mutants M1 (B), M2 (C), M3 (D) and M4 (E). Kissing loops in wild-type MTE and M4 mutant are shown as dashed lines. The SHAPE reactivities are shown on the structures using a coloring scheme, and penalties are shown as heat maps. Mutated residues are marked with black circles. The residues are renumbered compared to the original paper (72).