Table 1.

Gene sets enriched in phenotype high based on TCGA (Top 10).

Gene set name	SIZE	NES	NOM p-val	FDR q-val
KEGG_CITRATE_CYCLE_TCA_CYCLE	31	2.37	0.000	0.000
KEGG_GLYCOLYSIS_GLUCONEOGENESIS	62	2.11	0.000	0.028
KEGG_PENTOSE_PHOSPHATE_PATHWAY	27	2.07	0.002	0.033
KEGG_N_GLYCAN_BIOSYNTHESIS	46	1.95	0.012	0.069
KEGG_VIBRIO_CHOLERAE_INFECTION	54	1.92	0.000	0.074
KEGG_PROPANOATE_METABOLISM	33	1.90	0.006	0.071
KEGG_O_GLYCAN_BIOSYNTHESIS	30	1.90	0.004	0.064
KEGG_STEROID_BIOSYNTHESIS	17	1.88	0.012	0.063
KEGG_STARCH_AND_SUCROSE_METABOLISM	52	1.82	0.002	0.090
KEGG_BIOSYNTHESIS_OF_UNSATURATED_FATTY_ACIDS	22	1.75	0.026	0.135

NES normalized enrichment score, NOM nominal, FDR false discovery rate.