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. 2021 Jan 5;38(5):1943–1965. doi: 10.1093/molbev/msaa336

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© The Author(s) 2021. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Fig. 6. — Candidates for αCenH3-associated sequences in Meloidogyne incognita. (A) Alignment of consensus monomer sequences extracted from tandem repeated arrays (TRs) enriched in ChIP-seq analyses. The names of the consensus monomers were derived according to the cluster from which they originated. The conserved 19-bp box is indicated within the gray shaded area. (B) The percentage of identity among consensus monomer sequences. (C) Secondary structure of the conserved 19-bp box sequence. Folding free energy of the 19-bp fragment is −5.40 kcal/mol. (D) The most prominent examples of array organization of αCenH3-associated sequences (source data are supplied in supplementary fig. 6, Supplementary Material online). The color code of monomer sequences in arrays corresponds to monomer labels at the panel (A).