Reagent/Resource | Reference or Source | Identifier or Catalog Number |
---|---|---|
Experimental Models | ||
HeLa‐Kyoto cell line | Poser et al (2008) | N/A |
HeLa‐Kyoto G3BP2‐GFP bac cell line | Poser et al (2008) | N/A |
HeLa‐Kyoto GFP‐FUS WT bac cell line | Mateju et al (2017) | N/A |
HeLa‐Kyoto GFP‐FUS G156E bac cell line | Mateju et al (2017) | N/A |
HeLa‐Kyoto mcherry‐G3BP1 bac cell line | Poser et al (2008) | N/A |
HEK293T PABPC1‐Dendra‐2 | This paper | N/A |
HeLa Flp‐In T‐REx V5‐HSP70 | This paper | N/A |
Recombinant DNA | ||
eGFP | Clontech Laboratories, Inc. | Contact company |
pcDNA5/FRT/TO GFP | Hageman and Kampinga (2009) | N/A |
GFP‐DYRK3 | Wippich et al (2013) | N/A |
GFP‐DYRK3‐ΔNT | Wippich et al (2013) | N/A |
Sup35‐NM‐GFP‐DYRK3‐dN | This study | N/A |
mcherry‐HSP90α | Lev et al (2008) | N/A |
mcherry‐HSP90β | Picard et al (2006) | N/A |
myc‐RAPTOR | Wippich et al (2013) | N/A |
mRFP‐DCP1A | Kedersha et al (2008) | N/A |
pcDNA5/FRT‐TO‐V5‐HSP70 | Hageman and Kampinga (2009) | N/A |
Antibodies | ||
DYRK3 | Aviva‐System Biology | ARP30647_P050 |
Fibrillarin | EnCor Biotechnology Inc. | MCA‐38F3 |
GFP | Clontech | 632375 |
G3BP | BD bioscience | 611127 |
HSPA1A (Hsp70/Hsc70) | StressMarq Biosciences | SMC‐104A |
HSPA8 (Hsc70/Hsp73) | StressMarq Biosciences | SMC‐151A |
HSP90 total | StressMarq Biosciences | SMC‐149 |
HSP90 alpha | StressMarq Biosciences | SMC‐147A |
HSP90 beta | StressMarq Biosciences | SMC‐107A |
myc | Santa Cruz Biotechnology | SC‐40 |
Phospho‐PRAS40 (Thr246) | Cell Signaling | 13175 |
Phospho‐p70 S6 Kinase (Thr389) | Cell Signaling | 9205 |
Phospho‐ser10‐H3 | Activemotif | 39253 |
Phospho‐4E‐BP1 (Thr37/46) | Cell Signaling | 2855 |
p70 S6 Kinase | Cell Signaling | 9202 |
PRAS40 | Cell Signaling | 2610 |
Puromycin (Clone 12D10) | Merck | MABE343 |
SC‐35 | Sigma‐Aldrich | S4015 |
TIA‐1 | Santa Cruz Biotechnology | SC‐1751 |
TUBA4A | Sigma‐Aldrich | T6074 |
Ubiquitin | Dako | Z0458 |
4E‐BP1 | Cell Signaling | 9644 |
Alexa Fluor™ 594 Azide | Thermo Scientific | A‐10270 |
Donkey anti‐Mouse IgG (H + L), Alexa Fluor® 594 | Thermo Scientific | A‐21203 |
Donkey anti‐Mouse IgG (H + L), Alexa Fluor® 488 | Thermo Scientific | A‐21202 |
Donkey anti‐Mouse IgG (H + L), Alexa Fluor® 647 | Thermo Scientific | A‐31571 |
Donkey anti‐Rabbit IgG (H + L), Alexa Fluor® 488 | Thermo Scientific | A‐21206 |
MOUSE IGG HRP LINKED WHOLE AB | GE Healthcare | NXA931 |
RABBIT IGG HRP LINKED WHOLE AB | GE Healthcare | NA934 |
Oligonucleotides and other sequence‐based reagents | ||
ON‐TARGETplus Non‐targeting siRNA #1 | Dharmacon | Contact company |
ON‐TARGETplus human HSP90α siRNA | Dharmacon | Contact company |
ON‐TARGETplus human HSP90β siRNA | Dharmacon | Contact company |
Chemicals, Enzymes and other reagents | ||
Ammonium Chloride | Sigma‐Aldrich | 254134 |
Blasticidin S HCl | Gibco | 12172530 |
Complete‐EDTA | Roche | 11873580001 |
DAPI | Santa Cruz Biotechnology | SC3598 |
Duolink™ In Situ Red Starter Kit Mouse/Rabbit | Sigma‐Aldrich | DUO92101 |
Geldanamycin | Enzo Life Science | BML‐EI280 |
GFP‐Trap® Agarose beads | Chromotek | Gta‐20 |
GSK626616 | BioVision | B2452 |
G418‐Geneticin | Aurogene | L0015 |
Hygromycin B | Sigma‐Aldrich | H0654 |
Ly294002 | Sigma‐Aldrich | L9908 |
O‐Propargyl‐puromycin (OP‐puro) | Jena Bioscience | NU‐931‐05 |
Puromycin dihydrochloride | Sigma‐Aldrich | P8833 |
Sodium Arsenite | Carlo Erba | S7400 |
Sodium Arsenite | Sigma‐Aldrich | 106277 |
Tetracycline hydrochloride | Sigma‐Aldrich | T7660 |
VER‐155008 | Sigma‐Aldrich | SML0271 |
Wortmannin | Sigma‐Aldrich | W1628 |
Z‐Leu‐Leu‐Leu‐al (MG132) | Sigma‐Aldrich | C2211 |
17‐AAG | Enzo Life Science | BML‐EI308 |
Software | ||
Daniel's XL Toolbox | open‐source add‐in for Microsoft® Excel® | https://www.xltoolbox.net/ |
Fiji | NIH | https://fiji.sc/ |
GraphPad Prism6 software | GraphPad | https://www.graphpad.com |
ScanR Olympus analysis software | Olympus | https://www.olympus‐lifescience.com |
Other |