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. 2021 Mar 25;12(17):5977–5993. doi: 10.1039/d1sc00165e

Fig. 6. Effects of branching on staple behavior; (a) crystal structure of hydrocarbon cross-linked macrocyclic peptide (red, hydrocarbon staple: orange, PDB: 4N7Y) in complex with 14–3–3 (blue): computational analysis of the 14–3–3 surface reveals cavities 1 and 2 (green) in proximity to amino acids X(Me)R3 and X(Me)S6 that may be suitable sites through which to optimize affinity; (b) crystal structures of ESp (purple) and βRS8 (PDB: 4N7G, red) bound to 14–3–3 (PDB: 4N7Y); (c) crystal structures of ESp (purple, PDB: 4N7G) and βSS12 (red) in bound to 14–3–3 (PDB: 4N84);28 (d) structure of branched stapling amino acids S5, λS and λR; (e) SRC2-SP1 (salmon, PDB: 5DXB), SRC2-SP2 (orange, PDB: 5HYR), and SRC2-SP3 (purple, PDB: 5DX3) adopt conformations to alleviate syn-pentane interactions between the α- and γ-methyl groups.74.

Fig. 6