TABLE 1.
Differently expressed circRNAs in RNA-seq.
| Up-regulated | |||||
| Name | p-value | log2FoldChange | circRNA type | Chr. | Source gene name |
| hsa_circ_0003164 | 0.0020969 | 5.4848 | Exon | 14 | ZC3H14 |
| hsa_circ_0004276 | 0.0025305 | 5.4578 | Exon | 3 | SUCLG2 |
| hsa_circ_0004293 | 0.003171 | 5.3221 | Exon | 11 | DDX6 |
| hsa_circ_0005483 | 0.0069774 | 4.9833 | Exon | 16 | LMF1 |
| novel_circ_0004933 | 0.010181 | 4.8029 | Exon | 4 | GUCY1A1 |
| hsa_circ_0008558 | 0.0111 | 4.7886 | Exon | 16 | LONP2 |
| hsa_circ_0007716 | 0.011469 | 4.7377 | Exon | 17 | WSB1 |
| hsa_circ_0007803 | 0.012342 | 4.7311 | Exon | 1 | LZIC |
| hsa_circ_0001833 | 0.017868 | 4.533 | Exon | 8 | MROH1 |
| novel_circ_0002817 | 0.022658 | 4.3978 | Exon | 1 | TNN |
| hsa_circ_0003770 | 0.025343 | 4.3334 | Exon | 12 | AC073610.2;ARF3 |
| hsa_circ_0003060 | 0.028855 | 4.253 | Exon | 3 | SUCLG2 |
| hsa_circ_0083265 | 0.028879 | 4.253 | Exon | 8 | AC019257.8;ARHGEF10 |
| novel_circ_0001719 | 0.029043 | 4.249 | Exon | 15 | IQGAP1 |
| hsa_circ_0001377 | 0.029173 | 4.2479 | Exon | 3 | TNK2 |
| hsa_circ_0005133 | 0.029589 | 4.2381 | Exon | 6 | DDR1 |
| hsa_circ_0004888 | 0.031266 | 4.2048 | Exon | 2 | PPIG |
| novel_circ_0000033 | 0.036126 | 4.1116 | Exon | 10 | SHOC2 |
| novel_circ_0001995 | 0.036814 | 4.0813 | Intron | 17 | PAFAH1B1 |
| novel_circ_0004175 | 0.038492 | 4.0731 | Exon | 2 | XPO1 |
| novel_circ_0002133 | 0.038996 | 4.0627 | Exon | 17 | MBTD1 |
| hsa_circ_0002274 | 0.038149 | 4.0575 | Exon | 1 | LPGAT1 |
| novel_circ_0001407 | 0.040647 | 4.0352 | Exon | 14 | FOXN3 |
| novel_circ_0004223 | 0.043796 | 3.9864 | Exon | 2 | EXOC6B |
| hsa_circ_0006979 | 0.044475 | 3.9757 | Exon | 16 | RSL1D1 |
| novel_circ_0001137 | 0.044475 | 3.9757 | Exon | 13 | SETDB2 |
| hsa_circ_0000215 | 0.044973 | 3.9668 | Intron | 10 | CAMK1D |
| hsa_circ_0056838 | 0.044973 | 3.9668 | Exon | 2 | 7-Mar |
| hsa_circ_0008378 | 0.045624 | 3.9572 | Exon | 15 | PIAS1 |
| hsa_circ_0001699 | 0.045942 | 3.9522 | Exon | 7 | CDK13 |
| hsa_circ_0030716 | 0.046626 | 3.9423 | Exon | 13 | DOCK9 |
| hsa_circ_0001621 | 0.049329 | 3.9029 | Exon | 6 | CASP8AP2 |
| hsa_circ_0006458 | 0.049329 | 3.9029 | Exon | 20 | TCFL5 |
| novel_circ_0004181 | 0.049329 | 3.9029 | Exon | 2 | EHBP1 |
| Down-regulated | |||||
| ID | p-value | log2FoldChange | circRNA type | Chr. | Source gene name |
| novel_circ_0006548 | 0.0086321 | −4.8793 | Exon | 9 | NIPSNAP3A |
| hsa_circ_0001789 | 0.016851 | −4.5361 | Exon | 8 | RAB11FIP1 |
| hsa_circ_0012300 | 0.016611 | −4.5127 | Exon | 1 | PIK3R3;AL358075.4 |
| hsa_circ_0087961 | 0.020012 | −4.4137 | Intron | 9 | LPAR1 |
| hsa_circ_0004771 | 0.019942 | −4.4127 | Exon | 21 | NRIP1 |
| hsa_circ_0003572 | 0.020147 | −4.4092 | Exon | 1 | COP1 |
| hsa_circ_0002762 | 0.021368 | −4.3784 | Exon | 12 | CDK17 |
| hsa_circ_0007693 | 0.022732 | −4.3418 | Exon | 1 | ERI3 |
| hsa_circ_0001523 | 0.025985 | −4.2617 | Exon | 5 | ZNF608 |
| hsa_circ_0013252 | 0.028224 | −4.2383 | Exon | 1 | PTBP2 |
| hsa_circ_0023812 | 0.028701 | −4.2025 | Exon | 11 | NARS2 |
| hsa_circ_0077216 | 0.030247 | −4.1728 | Exon | 6 | ME1 |
| hsa_circ_0054877 | 0.030205 | −4.1723 | Exon | 2 | XPO1 |
| hsa_circ_0091669 | 0.031859 | −4.1681 | Exon | X | AFF2 |
| hsa_circ_0067985 | 0.030721 | −4.1637 | Exon | 3 | FNDC3B |
| hsa_circ_0005015 | 0.032924 | −4.1435 | Exon | 8 | HAS2 |
| hsa_circ_0039353 | 0.033533 | −4.1326 | Exon | 16 | CHD9 |
| hsa_circ_0019006 | 0.034523 | −4.0928 | Exon | 10 | WAPL |
| novel_circ_0005288 | 0.037215 | −4.0444 | Exon | 5 | MRPL22 |
| hsa_circ_0003602 | 0.040379 | −3.9934 | Exon | 3 | SMARCC1 |
| hsa_circ_0085616 | 0.042635 | −3.9764 | Exon | 8 | ASAP1 |
| hsa_circ_0004874 | 0.041586 | −3.9729 | Exon | 4 | SNX25 |
| novel_circ_0005877 | 0.041578 | −3.9717 | Exon | 6 | CASP8AP2 |
| novel_circ_0004624 | 0.044765 | −3.9235 | Exon | 3 | CNOT10 |
| hsa_circ_0020093 | 0.04839 | −3.8923 | Exon | 10 | ATRNL1 |
| hsa_circ_0035649 | 0.047265 | −3.8877 | Exon | 15 | USP3 |
| hsa_circ_0004843 | 0.048858 | −3.8841 | Exon | 12 | BAZ2A |
| hsa_circ_0028899 | 0.023216 | −2.9137 | Exon | 12 | RNF10 |
| hsa_circ_0003549 | 0.03858 | −2.8558 | Exon | 4 | SEC31A |
| hsa_circ_0072391 | 0.043716 | −1.9864 | Exon | 5 | HMGCS1 |