Fig. 2.

Embryo CHH hypermethylation is not restricted to the pericentromere. a Heatmaps of transposon density or methylation level in 25-kb windows across chromosome 10. Each methylation context has its own scale bar to visualize changes across tissues. Other chromosomes are presented in Additional file 1: Fig. S2. b CHH hypermethylation in mature embryos (green line) is not correlated with the amount of CG methylation in leaves (purple line). Five-window rolling average of 25-kb windows across chromosome 10 are plotted