Table 1. Mosquito collection and sequencing data generation.
Mosquito species | Month | Location | Pool name | No. of mosquitoes | Raw reads | Viral reads | Viral read proportion |
---|---|---|---|---|---|---|---|
Culex pipiens | June | Ningxia | Cx.p_Jun_NX | 1651 | 31,927,546 | 59,303 | 0.23% |
July | Shaanxi | Cx.p_Jul_SX | 2104 | 47,610,058 | 1,282,927 | 3.45% | |
July | Gansu | Cx.p_Jul_GS | 1647 | 22,426,930 | 56,294 | 0.30% | |
July | Ningxia | Cx.p_Jul_NX | 2139 | 40,324,558 | 142,331 | 0.43% | |
August | Shaanxi | Cx.p_Aug_SX | 2750 | 19,976,476 | 55,304 | 0.33% | |
August | Ningxia | Cx.p_Aug_NX | 207 | 5,454,292 | 14,588 | 0.32% | |
Culex tritaeniorhynchus | June | Ningxia | Cx.t_Jun_NX | 27 | 2,178,600 | 119 | 0.01% |
July | Shaanxi | Cx.t_Jul_SX | 503 | 12,653,570 | 55,281 | 0.65% | |
July | Gansu | Cx.t_Jul_GS | 782 | 15,096,738 | 769,383 | 5.96% | |
July | Ningxia | Cx.t_Jul_NX | 1440 | 47,547,796 | 40,818 | 0.11% | |
August | Shaanxi | Cx.t_Aug_SX | 900 | 15,298,094 | 8379 | 0.07% | |
August | Gansu | Cx.t_Aug_GS | 1300 | 13,032,834 | 95,124 | 0.97% | |
August | Ningxia | Cx.t_Aug_NX | 4370 | 24,813,632 | 31,030 | 0.15% | |
Anopheles sinensis | June | Ningxia | An._Jun_NX | 39 | 7,935,140 | 1256 | 0.02% |
July | Shaanxi | An._Jul_SX | 64 | 12,097,926 | 290,905 | 2.99% | |
July | Gansu | An._Jul_GS | 33 | 15,104,164 | 6873 | 0.05% | |
July | Ningxia | An._Jul_NX | 1034 | 9,425,030 | 1367 | 0.02% | |
August | Shaanxi | An._Aug_SX | 300 | 8,799,222 | 2838 | 0.04% | |
August | Gansu | An._Aug_GS | 200 | 9,246,162 | 14,362 | 0.18% | |
August | Ningxia | An._Aug_NX | 270 | 8,313,570 | 366 | 0.01% | |
Aedes | July | Ningxia | Ae._Jul_NX | 374 | 11,929,360 | 50,793 | 0.53% |
August | Ningxia | Ae._Aug_NX | 810 | 12,953,062 | 34,542 | 0.32% | |
Sum | 22,944 | 394,144,760 | 3,014,183 |