Table 2. Characterization of selected species of mosquito-borne viruses.
| Viral family | Viral species | Reference strain | Coverage* (%) | Depth | Per. ident. (%) | Collection month | Collection location | Mosquito species |
|---|---|---|---|---|---|---|---|---|
| Flaviviridae | Culex flavivirus | NC_008604 | 98.1 | 12.8 | 96.8 | Jun | NX | Cx.p |
| Flaviviridae | JEV | HM366552 | 41.0 | 16.4 | 98.1 | Jul | GS | Cx.t |
| Flaviviridae | Quang Binh virus | MH827524 | 35.2 | 1.9 | 98.1 | Jul | NX | Cx.t |
| Iflaviridae | Yongsan picorna-like virus 3 | NC_040584 | 100.0 | 3643.7 | 98.4 | Jul | SX | Cx.p |
| Phasmaviridae | Wuhan mosquito orthophasmavirus 1 | NC_031307 | 96.8 | 62.2 | 96.6 | Jul | SX | Cx.p |
| Phasmaviridae | Wuhan mosquito orthophasmavirus 2 | NC_031312 | 69.4 | 14.3 | 97.8 | Jul | SX | Cx.p |
| Phenuiviridae | Culex Bunyavirus 1 | MH188051 | 99.3 | 550.0 | 95.2 | Jul | SX | An. |
| Phenuiviridae | Wutai mosquito phasivirus | NC_031317 | 99.2 | 549.8 | 97.7 | Jul | SX | An. |
| Phenuiviridae | Yongsan bunyavirus 1 | NC_040759 | 97.8 | 29.8 | 97.5 | Aug | GS | Cx.t |
| Phenuiviridae | Culex Bunyavirus 2 | MH188052 | 97.0 | 29.3 | 96.3 | Jul | NX | Cx.p |
| Phenuiviridae | Culex Bunya-like virus | MH188002 | 15.0 | 105.8 | 97.2 | Jul | NX | Cx.p |
| Togaviridae | GETV | NC_006558 | 19.4 | 1.8 | 98.1 | Aug | NX | Ae. |
| Tymoviridae | Culex pipiens associated Tunisia virus | NC_040723 | 99.9 | 59.5 | 96.7 | Jul | NX | Cx.p |
| Tymoviridae | Wuhan Mosquito Virus 8 | NC_028265 | 99.6 | 72.3 | 98.0 | Jul | NX | Cx.t |
| Tymoviridae | Hubei mosquito virus 4 | NC_032231 | 99.0 | 644.9 | 95.6 | Jul | NX | Cx.p |
* The coverage (%) indicates the percentage of bases on the reference sequence covered by the reads.
Cx.p (Culex pipiens), Cx.t (Culex tritaeniorhynchus), An. (Anopheles sinensis), SX (Shaanxi Province), GS (Gansu Province), NX (Ningxia Hui Autonomous Region)