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. 2021 Apr 8;53(4):615–630. doi: 10.1038/s12276-021-00586-y

Table 1.

Summary of KPGP9 de novo assembly statistics.

Step Size Sequences Total Size (bp) N50 N90 Longest Scaffold genome coverage (%)
Contig 1,439,891 2,860,663,260 49,974 8719 604,770
Scaffolds (filtering steps) 2 K 1,344,398 2,895,066,623 300,579 54,077 2,055,172
5 K 1,327,495 2,921,071,090 1,027,730 172,103 6,646,083
10 K 1,321,040 2,956,383,059 8,116,997 977,239 45,450,559
20 K 1,320,902 2,961,961,259 11,947,405 1,320,382 77,015,144
40 K 1,182,591 2,963,912,249 13,083,805 1,336,383 75,957,870
Gap filled >500 31,505 2,862,402,237 13,235,598 1,787,215 75,412,104 92.30