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. 2021 Apr 23;12:655910. doi: 10.3389/fmicb.2021.655910

TABLE 1.

Primers characteristics and PCR conditions used for the amplification of the rpb1 sequences.

Primer Nucleotide sequence (5′–3′) Position on the sequence In combination with Expected amplicon length Ta°C t elong.
RPB1-3F GTC TTC GTG CAG TTT GGG A 727–745 RPB1-5R [1 μM] ≈1,410 bp 55 1 min 30 s
RPB1-4F CTA GGC CTG ATT GGA TGA T 1,204–1,222 RPB1-5RN [500 nM] ≈870 bp 54 1 min
RPB1-4F1 GCT CGT CCT GAT TGG ATG A 1,203–1,221 RPB1-5R [1 μM] ≈935 bp 55 1 min
RPB1-5R ACG ATT TGT TTT GGT ACC AT 2,119–2,138
RPB1-5RN TTC ATC TCA TCA CCA TCA A 2,048–2,066

The position of primers is given based on sequence of Rhizoglomus intraradices HG316020.1. The final concentration of the reverse primers is provided for each combination, as well as the expected product size, the temperature of annealing (Ta), and the time of elongation (t elong).