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. 2019 Sep 12;23(9):601–609. doi: 10.1089/gtmb.2019.0085

The Functional Polymorphism R129W in the BVES Gene Is Associated with Sporadic Tetralogy of Fallot in the Han Chinese Population

Yan Shi 1,*, Yongqing Li 1,*, Yuequn Wang 1,*, Jian Zhuang 2,*, Heng Wang 1, Min Hu 1, Xiaoyang Mo 1, Shusheng Yue 1, Yu Chen 1, Xiongwei Fan 1, Jimei Chen 2, Wanwan Cai 1, Xiaolan Zhu 2, Yongqi Wan 1, Ying Zhong 2, Xiangli Ye 1, Fang Li 1, Zuoqiong Zhou 1,2, Guo Dai 1, Rong Luo 3, Karen Ocorr 4, Zhigang Jiang 1, Xiaoping Li 3,, Ping Zhu 2,, Xiushan Wu 1,, Wuzhou Yuan 1,
PMCID: PMC8104024  PMID: 31386585

Abstract

Background: Tetralogy of Fallot (TOF) accounts for ∼10% of congenital heart disease cases. The blood vessel epicardial substance (BVES) gene has been reported to play a role in the function of adult hearts. However, whether allelic variants in BVES contribute to the risk of TOF and its possible mechanism remains unknown.

Methods: The open reading frame of the BVES gene was sequenced using samples from 146 TOF patients and 100 unrelated healthy controls. qRT-PCR and western blot assays were used to confirm the expression of mutated BVES variants in the TOF samples. The online software Polyphen2 and SIFT were used to predict the deleterious effects of the observed allelic variants. The effects of these allelic variants on the transcriptional activities of genes were examined using dual-fluorescence reporter assays.

Results: We genotyped four single nucleotide polymorphisms (SNPs) in the BVES gene from each of the 146 TOF patients. Among them, the minor allelic frequencies of c.385C>T (p.R129W) were 0.035% in TOF, but ∼0.025% in 100 controls and the Chinese Millionome Database. This allelic variant was predicted to be a potentially harmful alteration by the Polyphen2 and SIFT softwares. qRT-PCR and western blot analyses indicated that the expression of BVES in the six right ventricular outflow tract samples with the c.385C>T allelic variant was significantly downregulated. A dual-fluorescence reporter system showed that the c.385C>T allelic variant significantly decreased the transcriptional activity of the BVES gene and also decreased transcription from the GATA4 and NKX2.5 promoters.

Conclusions: c.385C>T (p.R129W) is a functional SNP of the BVES gene that reduces the transcriptional activity of BVES in vitro and in vivo in TOF tissues. This subsequently affects the transcriptional activities of GATA4 and NKX2.5 related to TOF. These findings suggest that c.385C>T may be associated with the risk of TOF in the Han Chinese population.

Keywords: Tetralogy of Fallot, BVES, single nucleotide polymorphism, second heart field genes

Introduction

Congenital heart disease (CHD) is the most common congenital abnormality, with an incidence rate of 7–10 in 1000 live births (Mendieta-Alcantara et al., 2013; Leirgul et al., 2014). Tetralogy of Fallot (TOF) is the most common cyanotic CHD phenotype, and occurs in 1 in 2500 live births (Hoffman and Kaplan, 2002). The overall prevalence of CHD is ∼10.0 per 1000 live births (Liu et al., 2015; Qu et al., 2016), with TOF accounting for ∼10% of the total (Di Felice and Zummo, 2009; Morgenthau and Frishman, 2018).

TOF and its variants have been observed as part of heritable syndromes, such as Alagille syndrome and DiGeorge syndrome. Allelic variants in Jagged1 (JAG1) (Notch signal receptor) and Hes-related family BHLH transcription factor with YRPW motif 2 (HEY2) (Notch signal target gene) have been linked to Alagille syndrome (Eldadah et al., 2001; Fischer et al., 2004; Hofmann et al., 2012); and microdeletions of 22q11 (Devriendt et al., 1998; Ito et al., 2002; Conti et al., 2003; Xu et al., 2011) affecting the T-Box 1 (TBX1) gene have been associated with DiGeorge syndrome (Devriendt et al., 1998; Ito et al., 2002; Conti et al., 2003; Xu et al., 2011). TOF has a high mortality rate (Bertranou et al., 1978; Starr, 2010) resulting in only ∼30% of TOF cases being familial; the remaining 70% are sporadic and of unknown etiology (Kola et al., 2011).

Although TOF is a CHD with complex structural defects, it is caused by a single structural dysplasia (Sarris et al., 2006; Sommer et al., 2008). In the late stage of looping, cells from the anterior cardiac region of the secondary heart field (SHF) are added to the outflow tract area, which promotes outflow tract prolongation and the correct fusion of the outflow tract myocardial wall and ventricular septum; TOF will occur if incorrect fusion takes place (Waldo et al., 2005; Bajolle et al., 2006; Schleich et al., 2013). In the animal models, knockout or haploinsufficiency of key genes in the SHF regulatory network, such as Gata4 (Laforest and Nemer, 2011), Nkx2.5 (Hami et al., 2011; Guner-Ataman et al., 2013), Tbx1 (Xu et al., 2004), T-box 20 (Tbx20) (Takeuchi et al., 2005), and heart and neural crest derivatives expressed 2 (Hand2) (Morikawa and Cserjesi, 2008) may lead to abnormal outflow tract development. Therefore, abnormal expression of genes in the SHF regulatory network likely plays an important role in the occurrence of TOF.

In sporadic TOF patients, allelic variants account for ∼10% of cases (Greenway et al., 2009), and genes in the SHF regulatory network are most frequently involved (Buckingham et al., 2005; Topf et al., 2014). For example, the first allele etiologically linked with sporadic TOF cases was the R25C variant of the NKX2.5 gene. The rate of allelic variants of NKX2.5 in TOF patients is ∼4% with the majority occurring among African American populations (Goldmuntz et al., 2001; Akcaboy et al., 2008; Gioli-Pereira et al., 2010; De Luca et al., 2011; Cao et al., 2015). Variants in the GATA4 gene, including N285S, have been identified, which affects binding to transcription factor binding sites for downstream genes (Zhang et al., 2008, 2009; Peng et al., 2010; Yang et al., 2013; Yoshida et al., 2016). Other genes such as Forkhead Box C1/2 (FOXC1/2), HAND1/2, T-box 5 (TBX5), and TBX1 in the SHF regulatory network have also been reported to have variants associated with TOF (Wang et al., 2011; Baban et al., 2014; Topf et al., 2014; Lu et al., 2016; Huang et al., 2017).

BVES, a highly evolutionarily conserved membrane protein, is highly expressed in adult hearts and skeletal muscles in vertebrates (Reese and Bader, 1999; Smith et al., 2008). The expression of BVES changes in patients with heart failure (Gingold-Belfer et al., 2011) and congenital ventricular septal defects (Zhang et al., 2006). In adult mice, Bves is highly expressed in the conduction system, and Bves knockout mice have abnormal pacing under stress (Froese et al., 2012). BVES variants are also identified in familial muscular dystrophy with arrhythmia (Schindler et al., 2016) and in sporadic TOF patients (Wu et al., 2013). Nevertheless, a clear association with TOF and an understanding of the possible mechanisms remain unclear.

In this study, we sequenced the BVES open reading frame using 89 tissue samples and 57 blood samples from patients with TOF, and identified four SNPs. Further analyses on the function of the SNPs were performed.

Materials and Methods

Samples

This study was approved by Ethics Committee of Hunan Normal University, Guangdong General Hospital, the Institutional Ethics Committee of Guangdong Academy of Medical Sciences, and the Institutional Ethics Committee of Sichuan Provincial People's Hospital. Written informed consent was obtained from each subject or their guardian.

Tissue and blood samples were obtained from patients and controls. TOF tissue samples were obtained from the hypertrophic muscle tissue of the right ventricular outflow tract (RVOT) during open-heart surgery for TOF. Normal samples were obtained from the RVOT tissue of persons who died accidentally and signed the consent for organ donation. Samples from patients with other congenital heart-related diseases were excluded from this study. After obtaining the tissue, it was quickly cut into small, 4–5 mm pieces with surgical scissors, placed into an Eppendorf tube, snap frozen in liquid nitrogen, and stored at −80°C before analysis.

Sequencing and analysis of the purified DNA

Human genomic DNA was isolated from EDTA-anticoagulated blood or RVOT tissue using the proteinase K method as previously described (Tian and Wang, 2006). Each BVES exon was amplified with 10 ng of DNA template with the fragment sizes ranging from 400 to 700 bp; the PCR primers are shown in Table 1. The amplified DNA fragments were purified by gel extraction (TianGen) and subjected to direct sequencing on an ABI 3130XL instrument using BigDye terminators (v3.1). BVES produces three transcripts (A, B, and C) all of which encode proteins of 360 amino acids in length. We sequenced the coding sequence (from exon 2 to exon 8) of the BVES transcript B (NM_147147) (Wu et al., 2013). The sequencing results were analyzed by Sequencher 5.4.5 against references (downloaded from the NCBI database of Human GRCh38/hg38).

Table 1.

Sequences of Primer Pairs for DNA Amplification and Mutational Analysis

Exon Forward primer (5′-3′) Reverse primer (5′-3′) Length (bp) Annealing temperature (°C)
E02 ATATATGTGCCTATGAGGGAATAGT GCCTGACAAAGAATACTCTGAAGC 615 57
E03 CTTCAGAAAAGGGAGGACTACTGTA CAGAAAGCCTAAACTTCAGAGAAAT 369 57
E04 AACTTCTATCACCATTTCACTTGCT AACTCTGTGACTGCTTTCTCCATT 479 57
E05 CATACCTCTGGCTCAATACTGGA CCCAATAATTCATAGCAGTGTTTCT 427 57
E06 ACGTGTAGAAGCTTGTGTGCA TCTCAAGATTACAAGTATCCCCA 464 57
E07 ATTTCTAGGAAAAGTACATGCTGCT AAAGTATATGGCAAAACCAGTGAAC 479 57
E08 TTCCTACAGTTTTATTTTCCAGTTG CCATCCTTGACCCTTCCTCAC 382 57

Quantitative real-time PCR

Total RNA was isolated from RVOT tissue homogenized in TRIzol (Life) and extracted with chloroform isoamyl alcohol; 0.5–1 μg RNA was used for cDNA synthesis using TransScript One-Step gDNA Removal and cDNA Synthesis SuperMix (Trans). Quantitative real-time PCR (qRT-PCR) for BVES transcripts (Primer: Forward, 5'-3'ccactctctaccgatgtgcc; Reverse, 5′-3′ ccggtacatgccactgagtt) was performed using standard PCR conditions using an Applied Biosystems Quanstudio 5 machine with SYBR Green PCR Master Mix (Takara). Expression levels were standardized to GAPDH (Primer: Forward, 5'-3cgaccactttgtcaagctca; Reverse, 5′-3′ cccctcttcaaggggtctac) expression and all the data were analyzed using the 2−ΔΔCT Livak method.

Western blot

Total protein samples were prepared in radioimmunoprecipitation assay (RIPA) buffer, and protein concentration was determined by BCA assay (Beyotime). Protein separations were carried out by electrophoresis through 12% SDS polyacrylamide gels. The proteins were then transferred to nitrocellulose membranes, blocked with 8% skim milk and incubated with anti-BVES antibody (1:1500 dilution; Absin); and anti-β-ACTIN antibody (1:3000 dilution, Proteintech). The signal densities of the BVES protein bands were quantified and normalized to β-ACTIN using Image J.

Plasmid construction

The wild-type (WT) human BVES coding regions was amplified using 1–5 μg of cDNA as a template (primers in Supplementary Table S1). A high-fidelity thermostable DNA polymerase (Takara) reagent was used for PCR under the following conditions: 3 min at 94°C followed by 30 cycles of 94°C for 15 s, 60°C for 15 s, and 72°C for 60 s, then 72°C for 5 min. SalI and XhoI were used to digest the PCR products and the pCMV-Myc vector. Next, the PCR products were ligated using solution I (Takara) into the linearized pCMV-Myc vector. This WT construct, pCMV-BVES-WT, was then used in the construction of the BVES variants, pCMV-BVES-L56L and pCMV-BVES-R129W where the resulting allelic variant plasmids that were constructed using the Mut Express II Fast Mutagenesis Kit V2 (Vazyme) according to the instructions of primers in Supplementary Table S1. This kit was also used to construct pGL3-BVES-L56L, pGL3-BVES-R129W plasmids.

The promoters of NKX2.5, GATA4, and MEF2C were amplified using the primers in Supplementary Table S1. PCR products and plasmids (pGL3-Bias) were digested with the same enzymes (NKX2.5, KPNI+XHOI; MEF2C, KPNI; GATA4, SacI) and the target fragments were ligated into vectors using ClonExpress Ultra One Step Cloning Kit (Vazyme).

Luciferase reporter assays

Human HEK293T cell lines were cultured in DMEM with 10% FBS. HEK293T cells were seeded in 24-well plates (1 × 105 cells/well) 24 h before transfection. The cells were then transfected using Lipofectamine 2000 (Invitrogen) according to the manufacturers' suggestions. We used 600 ng each of the expression plasmid (pCMVseries), the fluorescent reporter plasmid (pGL3series), and the Renilla luciferase plasmid (pRL-TK). After 24 h, luciferase activity was measured using Dual-Luciferase®Reporter Assay System (Promega).

Statistical analyses

To assess whether the means of the two groups were statistically different from each other, we applied the Student's t-test. A p-value of <0.05 was considered statistically significant.

Results

Identification of genetic variants of BVES in TOF patients

To examine the allelic variants in the BVES gene, the entire BVES coding sequences for all of the patients were analyzed and compared with the GenBank human BVES coding sequence. We identified four novel single nucleotide polymorphisms (SNPs): rs143510978 (c.408T>G, p.R136H) in one sample, rs751152136 (c.195T>C, p.H65H) in one sample, rs2275289 (c.385C>T, p.R129W) in 10 samples with 4 occurring in blood and 6 in RVOT tissues, and rs183390165 (c.1068C>T, p.V356V) in one sample (Table 2). We found that two of these novel SNPs, rs143510978 (p.R136H) and rs2275289 (p.R129W), caused amino acid changes (Fig. 1A–D) in regions that are highly evolutionarily conserved among primates (Fig. 1E). No significant differences were found in the minor allelic frequencies (MAF) of three of these SNPs (rs143510978, rs751152136, and rs183390165) between the TOF patients and the normal controls. Interestingly, the rs2275289 SNP occurred more frequently in TOF patients (TOF MAF = 0.0351, Normal group in 1000 Genomes = 0.0050) (Table 2). To exclude the possibility that variants in other genes involved in cardiac development were causative, the TOF-related genes (i.e., GATA4, NKX2.5, and TBX20) were sequenced from these patients' tissue samples; however, no deleterious allelic variants were detected. In addition, no damaging sequence variants were detected in the TBX1 gene, which has been identified as a candidate TOF gene based on its inclusion within the microdeletion of 22q11 associated with CHD (Yagi et al., 2003; Arnold et al., 2006; Zweier et al., 2007; Theveniau-Ruissy et al., 2008; Aguayo-Gomez et al., 2015).

Table 2.

Single Nucleotide Polymorphism of Blood Vessel Epicardial Substance in Tetralogy of Fallot Samples

SNP Tissue Nucleotide Genotype Exon Protein MAF in TOF MAF in NCBI
Blood (n = 57) Tissue (n = 89)
rs143510978 1 0 c.408T>G +/− Exon4 p.R136H G = 1/146 = 0.0034 G = 0.0022/11 (1000 Genomes)
rs751152136 0 1 c.195T>C +/− Exon2 p.H65H A = 1/146 = 0.0034 C = 0.000008/1 (ExAC)
rs2275289 4 6 c.385C>T +/− Exon4 p.R129W T = 10/146 = 0.0351 T = 0.0050 (1000 Genomes)
rs183390165 0 1 c.1068C>T +/− Exon8 p.V356V A = 1/146 = 0.0034 A = 0.0004/2 (1000 Genomes)

1000 Genomes, 1000 Genomes Project; ExAC, Exome Aggregation Consortium; +/−, heterozygote.

TOF, Tetralogy of Fallot; MAF, minor allelic frequencies; SNP, single nucleotide polymorphism.

FIG. 1.

FIG. 1.

Identification of the genetic variants of BVES in TOF patients. (A, B) Sequencing map of rs143510978 (p.R136H). (C, D) Sequencing map of rs2275289 (p.R129W). WT: Sequence maps of normal controls. (E) Evolutionary conservation analysis of rs143510978 (black box), rs2275289 (light gray box). BVES, blood vessel epicardial substance; TOF, Tetralogy of Fallot; WT, wild type.

We evaluated the allelic variant frequency of the rs2275289 polymorphic loci in the Chinese Millionome Database (CMDB), which is a unique large-scale Chinese genomics database produced by BGI (The Beijing Genomics Institute) and hosted in the National GenBank (Kinnunen et al., 2018). We found that the T allele frequency was 0.025% in the normal Chinese population, which is the same as we detected in the 100 normal controls. Owing to the fact that two SNPs (rs2275289 and rs143510978) caused changes in the protein sequence, we analyzed the protein function of the variants and the wild type using Polyphen2 (Adzhubei et al., 2010) and SIFT (Ng, 2003). In Polyphen2, the HumVar score is used in the diagnoses of Mendelian diseases for distinguishing between allelic variants with likely drastic effects from other more mildly deleterious alleles. The HumDiv score, which ranges from zero to one, is used to evaluate rare alleles at loci potentially involved in complex phenotypes. A zero score is assigned when the variant is considered neutral, the higher the score (closer to 1) the more likely the variant is to be dangerous. Both of the scores suggest that rs2275289 was likely damaging (HumVar score, 0.720; HumDiv score, 0.994), whereas the rs143510978 variant was likely benign (HumVar score, 0.004; HumDiv score, 0.003) (Fig. 2A). The SIFT prediction results also suggest that the SNP rs2275289, which changed a basic R into a nonpolar W, would not be tolerated and would be deleterious (Fig. 2B), no matter which transcript of the BVES gene is used for translating into a protein sequence (deleterious, score <0.05) (Supplementary Table S2). The SNP rs143510978, which encodes a conservative basic R to basic H switch, was predicted to have minimal effect on the protein function (score = 0.29).

FIG. 2.

FIG. 2.

Predicted protein function with the SNP rs143510978 (p.R136H) and rs2275289 (p.R129W). (A) Polyphen2. HumVar analysis of the rs2275289 (p.R129W) variant (left) gives scores close to 1, suggesting a harmful effect of the variation. Analysis of the rs143510978 (p.R136H) variant (right) produces a lower score, suggesting a neutral effect of the substitution. (B) SIFT. Analysis of rs2275289 (p.R129W) (black box) shows a significant probability of a deleterious effect, whereas for rs2275289 (p.R129W) (black oval), the probability of it being deleterious is not significant. Light gray oval and light gray box indicates the location of the variant. SNP, single nucleotide polymorphism.

Clinical diagnosis of 10 TOF patients containing the c.385C>T (p.R129W) allelic variant showed no clinical manifestations of cardiomyopathies or other self-reported inherited diseases. It was not known whether other family members of the BVES allelic variant carriers had the same alteration due to a failure to obtain a signed consent form (see information on patients containing c.385C>T (p.R129W) in Supplementary Table S3).

Effects of variant c.385C>T (p.R129W) on the expression of BVES in in vitro and in in vivo

We examined the effect of the c.385C>T variant on the expression of BVES itself in six RVOT tissue samples from patients with this variant. The qRT-PCR analysis showed that expression of BVES with the c.385C>T variant was significantly downregulated compared with normal RVOT tissue samples that did not contain this variant (Fig. 3A). This was also true for BVES protein expression in the tissues harboring the c.385C>T variant; we identified a 70% reduction as measured by quantitative western blot (Fig. 3B, C). See the information of normal samples in Supplementary Table S4. To examine if this variant affects the transcriptional expression of BVES in vitro, a double luciferase reporter system was developed (see Materials and Methods section). Results showed that the variant BVES containing the c.385C>T (p.R129W) allelic variant had significantly reduced expression compared with the wild-type BVES (Fig. 3D), indicating that this functional SNP reduces the activity/expression of BVES both in in vivo and in in vitro.

FIG. 3.

FIG. 3.

Effects of the allelic variant c.385C>T (p.R129W) on expression of BVES in vivo and in vitro. (A) Expression of BVES mRNA in RVOT from TOF patients containing p.R129W relative to normal controls (WT). (B) Western blot detection of protein expression of BVES with p.R129W in TOF patients compared with the normal samples (WT). (C) Quantification of data from (B) by densitometric analysis. WT: Normal RVOT tissue samples; R129W: TOF patient RVOT tissue samples containing c.385C>T (p.R129W). (D) Results of dual luciferase reporter assays. Vector: Transfection with an empty vector (plasmid, pGL3-Bias); WT: Plasmid containing wild-type BVES; p.R129W: Plasmid containing BVES with the c.385C>T (p.R129W) variant. Each group contains two plasmids, pRL-TK and a reporting plasmid. Each group had three wells and was repeated in triplicate. **p < 0.01; ***p < 0.001; Error bars show mean and SEM. RVOT, right ventricular outflow tract.

Effects of the BVES c.385C>T (p.R129W) variant on transcriptional expression of the genes in SHF regulatory network related to TOF

It is known that abnormalities of cardiac development controlled by the SHF regulatory network are a major cause of TOF (Ward et al., 2005; Schleich et al., 2013; Morgenthau and Frishman, 2018). To examine whether the allelic variant c.385C>T (p.R129W) in BVES affects the activities of genes in the SHF regulatory network, a luciferase reporter system was used to examine expression of NKX2.5, GATA4, and MEF2C. In this study, the allelic variant c.385C>T (p.R129W) and another BVES functional allelic variant c.166T>C (p.L56L), previously identified in TOF patients [47], were overexpressed using the eukaryotic transient overexpression vector (pCMV-Myc) (Zhou et al., 2013) and analyzed. Transfection efficiency was standardized with reference to Renilla luciferase activity resulting from the parallel introduction of this plasmid into the test cells. Each group contains three plasmids, pRL-TK, pCMV-BVES-WT/pCMV-BVES-L56L/pCMV-BVES-R129W, and pGL3-GATA4/pGL3-NKX2.5/pGL3-MEF2C. Each group had three wells and was repeated in triplicate. The results show that the promoter activities of NKX2.5 and GATA4 were significantly decreased by both BVES allelic variants compared with WT (Fig. 4A, B). However, no effect was observed on the promoter activity of MEF2C by overexpressing BVES or BVES with p.R129W, except in one case. The overexpression of BVES with p.L56L increased its promoter activity for unknown reasons (Fig. 4C). These results indicate that both BVES polymorphisms may downregulate the expression of the key genes NKX2.5 and GATA4 in the SHF regulatory network related to TOF.

FIG. 4.

FIG. 4.

Effects of BVES allelic variants on promoter activities of the key genes in the SHF regulatory network related to TOF. (A) Effects of both allelic variants p.L56L and p.R129W on the activity of the NKX2.5 promoter. (B) Effects of both allelic variants p.L56L and p.R129W on the activity of the GATA4 promoter. (C) Effects of both allelic variants p.L56L and p.R129W on the activity of the MEF2C promoter. Myc: pCMV-Myc, expression plasmid without a DNA fragment; WT: pCMV-BVES, wild type of BVES; L56L: pCMV-BVES-L56L, BVES with p.L56L; R129W: pCMV-BVES-R129W, BVES with p.R129W; ns, p > 0.05, no significance; **p < 0.01; ***p < 0.001; Error bar shows SEM. SHF, secondary heart field.

Discussion

In this study, the BVES open reading frame was sequenced in 146 samples (89 tissue samples and 57 blood samples) from patients with sporadic TOF. We identified a likely damaging SNP c.385C>T (p.R129W) with a frequency of 0.035% in TOF patients and compared its frequency with the general Chinese population by analyzing the CMDB.

SNPs have previously been linked to CHD. For example, the SNP rs3130933 in POU5F1 (MAF: CASE-0.018, Controls-0.008) increases the risk of CHD through reduction of gene expression (Lin et al., 2015). Our study classified the rs2275289 (p.R129W) SNP in BVES as detrimental by multiple software analyses, and we showed using both in vitro and in vivo analyses that this variant reduces the activity of the gene itself; as well as affecting activities of the downstream genes.

It is well known that the transcription factor NKX2.5 is a key gene in the regulation of SHF formation; and that defects in this gene are associated with TOF (Goldmuntz et al., 2001; Guner-Ataman et al., 2013). The Gata4- and Nkx2.5-positive cells in the anterior mesoderm are recruited for the formation of the outflow tract (Guner-Ataman et al., 2013). In chicken embryos, ablation of the anterior SHF cells is associated with a decrease in the expression of Nkx2.5, leading to TOF (Ward et al., 2005). In zebrafish, Nkx2.5 knockdown reduces the proliferation of SHF myocardial progenitor cells, leading to abnormal ventricular and outflow tract development (Guner-Ataman et al., 2013). In mice, the Gata4 heterozygous mutants exhibit double outflow tract, atrioventricular septal defect, mitral and tricuspid valve thickening, and myocardial thinning (Laforest and Nemer, 2011). Our results suggest that the rs2275289 (p.R129W) SNP in BVES reduces its own expression and likely decreases expression of NKX2.5 and GATA4, suggesting a role for BVES in TOF etiology.

In conclusion, the allelic variant c.385C>T (p.R129W) in BVES is a functional polymorphism, which decreases the transcriptional activity of the gene itself as well as the transcriptional activities of key genes in the SHF transcriptional network related to TOF. However, the pathogenic mechanism of TOF caused by allelic variant c.385C>T (p.R129W) in BVES needs further studies.

Supplementary Material

Supplemental data
Supp_Table1-4.pdf (29.8KB, pdf)

Acknowledgments

This study was supported in part by grants from the National Natural Science Foundation of China (Nos. 81470449, 81670290, 81470377, 31872315, 31572349, 81670288, 81700338, and 81570279), the Cooperative Innovation Center of Engineering and New Products for Developmental Biology of Hunan Province (No. 2013-448-6), National Key Research and Development Program of China (Nos. 2018YFA0108700 and 2017YFA0105602), NSFC Projects of International Cooperation and Exchanges (No. 81720102004), Scientific Research Fund of Hunan Provincial Education Department (No. 18A028), the Research Team Project of Natural Science Foundation of Guangdong Province of China (No. 2017A030312007), the key program of Guangzhou science research plan (805212639211), the Special Project of Dengfeng Program of Guangdong Provincial People's Hospital (No. DFJH201802), Hunan Provincial Natural Science Foundation of China (Nos. 2015JJ3087 and 2018JJ2666), and Science and Technology Planning Projects of Guangdong Province of China (Nos. 2017A070701013, 2017B090904034, 2017030314109, and 2019B020230003).

Author Disclosure Statement

No competing financial interests exist.

Supplementary Material

Supplementary Table S1

Supplementary Table S2

Supplementary Table S3

Supplementary Table S4

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