TABLE 1.
Properties of isolate genomes analyzed and metagenome-assembled genomesa
| Isolate | Metagenome | Group | No. of genes |
Completeness (%) |
Contamination (%) |
Quality (%) |
||||
|---|---|---|---|---|---|---|---|---|---|---|
| Isol | MAG | Isol | MAG | Isol | MAG | Isol | MAG | |||
| E158 | MG24 | DAEC | 4,931.0 | 6,158.0 | 94.6 | 88.3 | 0.0 | 0.9 | 90.1 | 83.8 |
| E124 | MG23 | DAEC | 5,026.0 | 4,611.0 | 95.5 | 95.5 | 0.0 | 0.9 | 91.0 | 91.0 |
| Q51 | MG31 | DAEC | 5,040.0 | 8,607.0 | 94.6 | 81.1 | 0.0 | 7.2 | 90.1 | 45.1 |
| B45 | MG6 | ETEC | 4,747.0 | 4,378.0 | 94.6 | 95.5 | 0.0 | 0.9 | 90.1 | 91.0 |
| E184 | MG19 | ETEC | 4,864.0 | 5,205.0 | 95.5 | 95.5 | 0.0 | 2.7 | 91.0 | 82.0 |
| E230 | MG25 | DAEC | 6,990.0 | 5,025.0 | 91.0 | 95.5 | 0.0 | 0.9 | 86.5 | 91.0 |
| B200 | MG15 | ETEC | 4,659.0 | 4,838.0 | 95.5 | 97.2 | 0.0 | 2.7 | 91.0 | 82.9 |
| Q196 | MG32 | DAEC | 5,052.0 | 5,831.0 | 94.6 | 92.8 | 0.0 | 3.6 | 90.1 | 74.8 |
a
Isol, isolate genome; MAG, metagenome-assembled genome; ETEC, enterotoxigenic E. coli; DAEC, diffusely adhering E. coli. Completeness, contamination, and quality values are expressed as percentages.