TABLE 5.
PCR/sequencing of positive Unyvero specimens negative by SoC testing
| Species | Study arm | No. of false-positive specimens | No. confirmed by PCR followed by sequencing/no. of false-positive specimens | No. with possible cross-reactivity/total (%) |
|---|---|---|---|---|
| Acinetobacter species | Prospective | 11 | 11/11 | |
| Archived | 3 | 3/3 | ||
| Total | 14 | 14/14 (100.0) | ||
| C. freundii | Prospective | 3 | 3/3 | |
| Archived | 5 | 4/5 | 1/5 | |
| Total | 8 | 7/8 (87.5) | 1/8 (12.5)a | |
| E. cloacae complex | Prospective | 7 | 7/7 | |
| Archived | 0 | |||
| Total | 7 | 7/7 (100.0) | ||
| E. coli | Prospective | 30 | 18/30 | |
| Archived | 17 | 15/17 | ||
| Total | 47 | 33/47 (70.2) | ||
| H. influenzae | Prospective | 48 | 42/48 | 5/48 |
| Archived | 21 | 17/21 | 4/21 | |
| Total | 69 | 59/69 (85.5) | 9/69 (13.0)b | |
| K. oxytoca | Prospective | 8 | 7/8 | |
| Archived | 6 | 6/6 | ||
| Total | 14 | 13/14 (92.9) | ||
| K. pneumoniae | Prospective | 10 | 5/10 | |
| Archived | 10 | 7/10 | ||
| Total | 20 | 12/20 (60.0) | ||
| K. variicola | Prospective | 2 | 2/2 | |
| Archived | 4 | 2/4 | ||
| Total | 6 | 4/6 (66.7) | ||
| M. catarrhalis | Prospective | 13 | 13/13 | |
| Archived | 9 | 8/9 | ||
| Total | 22 | 21/22 (95.5) | ||
| M. morganii | Prospective | 3 | 3/3 | |
| Archived | 0 | |||
| Total | 3 | 3/3 (100.0) | ||
| Proteus species | Prospective | 6 | 6/6 | |
| Archived | 7 | 6/7 | ||
| Total | 13 | 12/13 (92.3) | ||
| P. aeruginosa | Prospective | 43 | 41/43 | |
| Archived | 2 | 2/2 | ||
| Total | 45 | 43/45 (95.6) | ||
| S. marcescens | Prospective | 5 | 4/5 | |
| Archived | 3 | 1/3 | ||
| Total | 8 | 5/8 (62.5) | ||
| S. aureus | Prospective | 41 | 31/41 | |
| Archived | 21 | 18/21 | ||
| Total | 62 | 49/62 (79.0) | ||
| S. maltophilia | Prospective | 22 | 21/22 | |
| Archived | 10 | 10/10 | ||
| Total | 32 | 31/32 (96.9) | ||
| S. pneumoniae | Prospective | 10 | 10/10 | |
| Archived | 5 | 4/5 | ||
| Total | 15 | 14/15 (93.3) |
In one of eight false-positive C. freundii cases, PCR/sequencing identified Citrobacter youngae.
In 9 of 69 false-positive H. influenzae cases, PCR/sequencing identified Haemophilus haemolyticus (5 cases), Aggregatibacter aphrophilus (3 cases), or Haemophilus parainfluenzae (1 case).