Table 2. Nucleotide composition of mitochondrial genomes of the six Chironomidae species.
Species | Whole genome | Protein coding genes | First codon position | Second codon position | Third codon position | tRNA genes | 12S rRNA | 16S rRNA | Control region | |
---|---|---|---|---|---|---|---|---|---|---|
A+T% | Chironomus tepperi | 76.7 | 74.3 | 67.6 | 67.6 | 87.6 | 79.0 | 82.6 | 84.3 | 93.0 |
Potthastia sp. | 76.8 | 74.7 | 69.0 | 66.1 | 88.9 | 76.8 | 78.1 | 82.7 | 93.3 | |
Rheocricotopus villiculus | 77.3 | 74.4 | 69.6 | 67.4 | 86.0 | 79.5 | 84.1 | 84.4 | 93.7 | |
Parochlus steinenii | 72.4 | 69.0 | 64.6 | 64.7 | 77.5 | 73.2 | 76.4 | 80.1 | 85.5 | |
Prodiamesa olivacea | 75.8 | 73.4 | 66.7 | 65.5 | 88.2 | 76.2 | 78.1 | 81.9 | 89.2 | |
Clinotanypus yani | 75.0 | 72.5 | 65.4 | 65.1 | 87.0 | 75.7 | 79.1 | 81.3 | 88.7 | |
AT-Skew | Chironomus tepperi | −0.14 | −0.20 | −0.09 | −0.41 | −0.13 | 0.03 | −0.01 | 0.00 | −0.11 |
Potthastia sp. | −0.13 | −0.20 | −0.10 | −0.39 | −0.12 | 0.03 | 0.01 | 0.04 | −0.05 | |
Rheocricotopus villiculus | −0.12 | −0.18 | −0.09 | −0.40 | −0.08 | 0.02 | 0.01 | 0.05 | −0.07 | |
Parochlus steinenii | −0.11 | −0.19 | −0.09 | −0.40 | −0.11 | 0.04 | 0.05 | 0.03 | 0.06 | |
Prodiamesa olivacea | −0.12 | −0.19 | −0.10 | −0.40 | −0.09 | 0.03 | 0.04 | 0.01 | 0.02 | |
Clinotanypus yani | −0.13 | −0.19 | −0.10 | −0.39 | −0.10 | 0.02 | 0.00 | 0.03 | −0.08 | |
GC-Skew | Chironomus tepperi | −0.06 | −0.02 | 0.19 | −0.18 | −0.12 | −0.13 | −0.37 | −0.36 | −0.43 |
Potthastia sp. | −0.03 | 0.02 | 0.27 | −0.16 | −0.15 | −0.12 | −0.24 | −0.28 | −0.31 | |
Rheocricotopus villiculus | −0.04 | −0.01 | 0.25 | −0.18 | −0.17 | −0.09 | −0.23 | −0.34 | −0.19 | |
Parochlus steinenii | −0.04 | −0.01 | 0.21 | −0.17 | −0.10 | −0.06 | −0.21 | −0.26 | −0.18 | |
Prodiamesa olivacea | −0.04 | 0.00 | 0.25 | −0.16 | −0.21 | −0.09 | −0.24 | −0.29 | −0.16 | |
Clinotanypus yani | −0.06 | 0.00 | 0.24 | −0.18 | −0.18 | −0.12 | −0.28 | −0.34 | −0.39 |