Table 2. Kyoto encyclopedia of genes and genomes (KEGG) pathway analysis for the differential genes.
Description | Generatio | Pvalue | p.adjust | qvalue | geneID |
Fat digestion and absorption | 6/57 | 4.80E-07 | 8.45E-05 | 7.84E-05 | ABCG5/DGAT2/MOGAT3/APOA1/FABP1/ABCG8 |
Cholesterol metabolism | 5/57 | 2.48E-05 | 0.002180513 | 0.002021408 | APOA2/ABCG5/LPA/APOA1/ABCG8 |
PPAR signaling pathway | 5/57 | 0.000199794 | 0.011721233 | 0.010865975 | APOA2/SCD5/ACSL6/APOA1/FABP1 |
Protein digestion and absorption | 5/57 | 0.000531847 | 0.023401248 | 0.02169374 | COL12A1/COL3A1/SLC7A9/COL1A2/COL1A1 |
AGE-RAGE signaling pathway in diabetic complications | 5/57 | 0.000672758 | 0.023681078 | 0.021953152 | NOX4/AKT3/COL3A1/COL1A2/COL1A1 |
Central carbon metabolism in cancer | 4/57 | 0.001465681 | 0.042993318 | 0.039856246 | AKT3/KIT/PFKP/SLC2A2 |
Platelet activation | 5/57 | 0.001768727 | 0.044470846 | 0.041225963 | AKT3/PRKG1/COL3A1/COL1A2/COL1A1 |
ECM-receptor interaction | 4/57 | 0.003392436 | 0.074633591 | 0.069187838 | TNC/COL1A2/COL1A1/THBS2 |
*KEGG, Kyoto Encyclopedia of Genes and Genomes; PPAR, peroxisome proliferators-activated receptor; ECM, extracellular matrix. GeneRatio: Annotation of genes in this pathway, annotation of genes in all KEGG pathways, and the ratio of the two; BgRatio: All genes annotated to pathway, all genes annotated to KEGG pathways, and the ratio of the two. Pvalue: P value of hypergeometric test; P.adjust: The P value corrected by multiple hypothesis testing; Qvalue: Q value; GeneID: geneID annotated to the pathway; Count: The number of genes annotated to the pathway.