FIGURE 2.

Transcriptional misregulation in fruit from the single ripening mutants Cnr, nor, and rin. (A) Principal component analysis of total mapped RNAseq reads for Cnr, nor, rin and wild type (WT) fruit at the mature green (MG) and red ripe (RR) stages. (B) Number of differentially expressed genes (DEGs; P_adj ≤ 0.05) up- or down-regulated for each mutant compared to WT. (C) Total, unique, and intersecting up- and down-regulated DEGs across ripening (RR/MG) for each genotype visualized using UpSetR. Dots connected by lines indicate common DEGs between categories and single dots indicate unique DEGs, with the number of genes in each category listed above.