Table 1.

The number of classified sequences obtained from each analyzed stage of tissue necrosis.

Status	Sample		Total reads	RI	SHD	Neff Shannon/exp H	D	Neff/D2/Inverse Simpson
H	A		3,635	70	0.98	2.67	6.43E−01	1.55
H	B		1,939	70	1.07	3.05	6.04E−01	1.65
H	C		1,734	71	1.44	4.21	3.88E−01	2.58
H	D		1,110	113	2.73	15.27	1.77E−01	5.65
H	E		865	93	2.31	10.03	2.48E−01	4.04
H	F		793	73	1.89	6.63	4.10E−01	2.44
H	G		676	78	2.69	14.69	1.55E−01	6.46
DI	H		33,752	261	3.39	29.55	6.15E−02	16.26
DI	I		46,855	537	3.63	37.68	7.03E−02	14.22
DI	J		19,994	389	3.65	38.32	6.47E−02	15.45
DI	K		21,844	356	3.46	31.73	7.64E−02	13.09
DI	L		20,039	386	3.62	37.24	7.41E−02	13.49
DI	M		44,301	479	3.55	34.89	7.31E−02	13.68
DM	N		10,705	371	3.53	34.29	6.51E−02	15.36
DM	O		48,436	363	3.46	31.90	6.89E−02	14.50
DA	P		38,101	452	3.30	27.19	9.66E−02	10.35
DA	Q		24,489	514	3.82	45.74	6.16E−02	16.23
DA	R		28,106	325	3.35	28.55	8.31E−02	12.03

Status: Healthy (H); initial disease (DI); intermediary disease (DM); advanced disease (DA). Richness indices (RI), Shannon H diversity (SHD), Effective number of species (Neff Shannon/exp. H), Simpson index (D), Effective number of species (Neff/D2/inverse Simpson) based on the total reads found in each sample.