Skip to main content
. 2021 May 10;11:9901. doi: 10.1038/s41598-021-89100-y

Table 1.

Primer sequences and characteristics of PCR amplifications in I. germanica.

Gene Description Accession numbers Arabidopsis ortholog Primer sequence (forward/reverse) Product size (bp) Primers TM (℃) Amplification efficiency (%) R2
IgEF1α Elongation factor 1 alpha MN602628 At1G07940

5′-ACCATACCAGGCTTGATAACTCC-3′

5′-AGACTGGTACAAGGGTCCTACTCTC-3

171 59.4/59.5 100.63% 0.9995
IgGAPDH Glyceraldehyde-3-phosphate dehydrogenase MN602629 At2G24270

5′-TTTGCTGACGACTCGGACAC-3′

5′-CTTGGATTTGGTTGCTGCTAAT-3′

204 59.1/59.1 98.47% 0.9998
IgACT6 Actin6 MN602630 At2G31200

5′-TGCTGCTTTGATTGCGTGT-3′

5′-AGCTCCATACAATCGACTCAGG-3′

107 58.2/58.6 98.74% 0.9985
IgUBQ Ubiquitin MN602631 At4G05320

5′-GATGGTCGCACACTTGCTGA-3′

5′-GGAGCCTGAGAACAAGATGGA-3′

295 59.9/59.1 101.74% 0.9997
IgUBC Ubiquitin-protein ligase MN602632 At5G53300

5′-CCTCCCTTTCCAATCGCTAA-3′

5′-AGGTGCTGCTGTCCATCTGTT-3′

162 59.5/59.5 101.67% 0.9997
IgEF1β Elongation factor 1β MN602633 At5G19510

5′-TTGGAGGAGACCGTTCGC-3′

5′-TCATTGGCAGGCTCAACAGT-3′

173 58.8/58.7 100.64% 0.9995
IgPGK Phosphoglycerate kinase MN602634 At1G56190

5′-GTTGTGCCAGCGTCTGAAAT-3’

5′-ACCTCGGCTACTCCCACTTT-3′

263 58.4/58.0 101.19% 0.9994
IgTUB Beta-tubulin MN602635 At1G64740

5′-GTTTGACTTCCAGTTTGGTTGTG-3′

5′-GCAAAACAAACACCCGCTTA-3′

274 59.0/59.0 98.77% 0.9984
IgF3H Flavanone 3-hydroxylase MN602636 At3G51240

5′-GGTTCATTGTCTCCAGCCATC-3′

5′-ATTGCTTCGGAGAGGACCC-3′

202 59.2/58.8 98.70% 0.9991