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. 2021 May 11;134:104483. doi: 10.1016/j.compbiomed.2021.104483

Table 5.

Binding affinity, hydrophobic interactions, hydrogen bonds, and hydrogen bond distance of selected compounds to 3C-like protease.

Comp No CHEMBL ID Binding Affinity (kcal/mol) Hydrophobic interaction Hydrogen bonds Hydrogen bond distance (Å)
S X77 −10.1 His41,
Cys44,
Met49,
Cys145
Gly143 2.11
21 CHEMBL194398 −10.3 Tyr239,
Leu287
Tyr237 3.59
22 CHEMBL196635 −9.6 Val171,
Ala193
Lys137, Thr199,
Thr196,
Asn238
3.00,
2.06,
2.11,
2.04
23 CHEMBL377150 −9.8 His41,
Cys44,
Met49
Arg118,
Asp187
Tyr54,
Thr24,
Met49,
Arg188,
Asn119,
Gly143
3.24
2.96
2.40,
2.16
2.19
31 CHEMBL208763 −9.5 Tyr237,
Tyr239,
Leu272,
Leu287
Lys137
Asp197 3.33
40 CHEMBL210097 −9.5 Val171
Ala194,
Leu287
Gly275,
Leu272
2.01
2.19
42 CHEMBL212218 −9.2 Met49,
Pro168
Thr25, 1.98
57 CHEMBL378342 −10.0 Pro108,
Ile200,
Val202,
His246,
Ile249
Glu240 2.32