Table 8.
Table displaying binding energy of 3CLpro-compound complexes obtained by MM–PBSA.
S No. | Protein/Protein-ligand complex | Van der Waal Energy (KJmol−1) |
Electrostatic Energy (KJ mol−1) |
Polar salvation energy (KJ mol−1) | SASA energy (KJ mol−1) | Binding Energy (KJ mol−1) |
---|---|---|---|---|---|---|
R | 3CLpro -X77 complex | −114.85 ± 8.88 | −8.42 ± 6.92 | 81.55 ± 11.92 | −15.657 ± 1.025 | −57.380 ± 9.773 |
1 | 3CLpro-compound 21 complex | −112.59 ± 8.72 | −13.90 ± 8.01 | 88.28 ± 13.74 | −15.199 ± 1.494 | −53.415 ± 10.654 |
2 | 3CLpro-compound 22 complex | −93.1 ± 18.14 | −20.05 ± 1.03 | 77.97 ± 40.20 | −12.302 ± 2.176 | −47.490 ± 34.959 |
3 | 3CLpro-compound 23 complex | −27.24 ± 8.26 | −2.62 ± 11.15 | 6.07 ± 47.33 | −4.210 ± 1.751 | −28.003 ± 48.454 |
4 | 3CLpro-compound 31 complex | −0.23 ± 0.22 | 0.10 ± 1.43 | 8.86 ± 60.08 | 0.010 ± 1.502 | 8.739 ± 60.651 |
5 | 3CLpro-compound 40 complex | −111.82 ± 17.44 | −14.84 ± 9.42 | 71.04 ± 20.59 | −14.801 ± 2.107 | −70.419 ± 11.211 |