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. 2021 May 10;13:80. doi: 10.1186/s13073-021-00891-1

Table 2.

Rare predicted deleterious FBLN2 and PDGFD variants* among 4175 PAH cases**

Case ID Sex Agedx PAH subclass Ancestry Gene *** Exon Nucleotide change Amino acid change Variant type MAF (gnomAD exomes) CADD score Revel
08-018 F 70 IPAH EUR FBLN2 12 c.2639G>T p.(Gly880Val) D-Mis 1.63E−05 27.1 0.94
17-035 F 41 APAH EAS FBLN2 12 c.2666G>A p.(Gly889Asp) D-Mis 27.6 0.94
12-207 F 44 IPAH EUR FBLN2 13 c.2794T>C p.(Phe923Leu) D-Mis 2.11E−05 29.6 0.92
23-001 M 66 IPAH EUR FBLN2 14 c.2944G>T p.(Asp982Tyr) D-Mis 1.88E−05 34.0 0.95
29-031 F 57 IPAH EUR FBLN2 14 c.2944G>T p.(Asp982Tyr) D-Mis 1.88E−05 34.0 0.95
34-005 M 69 IPAH EUR FBLN2 14 c.2944G>T p.(Asp982Tyr) D-Mis 1.88E−05 34.0 0.95
W000210 F 52 IPAH EUR FBLN2 14 c.2944G>T p.(Asp982Tyr) D-Mis 1.88E−05 34.0 0.95
W000073 F 40 IPAH AFR PDGFD 2 c.166G>A p.(Gly56Ser) D-Mis 1.99E−05 22.9 0.64
JM950 F 2 IPAH EUR PDGFD 2 c.250C>T p.(Arg84Trp) D-Mis 1.59E−05 16.4 0.51
E012465 F 55 IPAH EUR PDGFD 3 c.385G>A p.(Glu129Lys) D-Mis 25.2 0.262
E014342 F 40 IPAH EUR PDGFD 3 c.385G>A p.(Glu129Lys) D-Mis 25.2 0.262
E014400 F 43 IPAH EUR PDGFD 3 c.442G>A p.(Asp148Asn) D-Mis 7.97E−06 25.2 0.41
E000844 F 39 IPAH EUR PDGFD 6 c.770T>C p.(Leu257Pro) D-Mis 4.01E−06 31.0 0.62
13-037 M 43 DTOX EUR PDGFD 6 c.883C>T p.(Arg295Cys) D-Mis 4.00E−06 35.0 0.56
23-025 F 41 IPAH EUR PDGFD 6 c.926C>G p.Ser309Cys D-Mis 28.4 0.22
E000820 F 73 IPAH EUR PDGFD 6 c.961T>A p.(Tyr321Asn) D-Mis 1.21E−05 33.0 0.34
E010173 F 74 IPAH EUR PDGFD 6 c.961T>A p.(Tyr321Asn) D-Mis 1.21E−05 33.0 0.34

*Rare, deleterious variants defined as gnomAD_exome_ALL AF ≤ 1.00E−04 and LGD or missense with variable REVEL cut-off (FBLN2 0.92 and PDGFD 0.22)

** Cases are heterozygous for the indicated variants

***Transcripts: FBLN2 NM_001998.3 and PDGFD NM_033135.4