Table 2.
Case ID | Sex | Agedx | PAH subclass | Ancestry | Gene *** | Exon | Nucleotide change | Amino acid change | Variant type | MAF (gnomAD exomes) | CADD score | Revel |
---|---|---|---|---|---|---|---|---|---|---|---|---|
08-018 | F | 70 | IPAH | EUR | FBLN2 | 12 | c.2639G>T | p.(Gly880Val) | D-Mis | 1.63E−05 | 27.1 | 0.94 |
17-035 | F | 41 | APAH | EAS | FBLN2 | 12 | c.2666G>A | p.(Gly889Asp) | D-Mis | – | 27.6 | 0.94 |
12-207 | F | 44 | IPAH | EUR | FBLN2 | 13 | c.2794T>C | p.(Phe923Leu) | D-Mis | 2.11E−05 | 29.6 | 0.92 |
23-001 | M | 66 | IPAH | EUR | FBLN2 | 14 | c.2944G>T | p.(Asp982Tyr) | D-Mis | 1.88E−05 | 34.0 | 0.95 |
29-031 | F | 57 | IPAH | EUR | FBLN2 | 14 | c.2944G>T | p.(Asp982Tyr) | D-Mis | 1.88E−05 | 34.0 | 0.95 |
34-005 | M | 69 | IPAH | EUR | FBLN2 | 14 | c.2944G>T | p.(Asp982Tyr) | D-Mis | 1.88E−05 | 34.0 | 0.95 |
W000210 | F | 52 | IPAH | EUR | FBLN2 | 14 | c.2944G>T | p.(Asp982Tyr) | D-Mis | 1.88E−05 | 34.0 | 0.95 |
W000073 | F | 40 | IPAH | AFR | PDGFD | 2 | c.166G>A | p.(Gly56Ser) | D-Mis | 1.99E−05 | 22.9 | 0.64 |
JM950 | F | 2 | IPAH | EUR | PDGFD | 2 | c.250C>T | p.(Arg84Trp) | D-Mis | 1.59E−05 | 16.4 | 0.51 |
E012465 | F | 55 | IPAH | EUR | PDGFD | 3 | c.385G>A | p.(Glu129Lys) | D-Mis | – | 25.2 | 0.262 |
E014342 | F | 40 | IPAH | EUR | PDGFD | 3 | c.385G>A | p.(Glu129Lys) | D-Mis | – | 25.2 | 0.262 |
E014400 | F | 43 | IPAH | EUR | PDGFD | 3 | c.442G>A | p.(Asp148Asn) | D-Mis | 7.97E−06 | 25.2 | 0.41 |
E000844 | F | 39 | IPAH | EUR | PDGFD | 6 | c.770T>C | p.(Leu257Pro) | D-Mis | 4.01E−06 | 31.0 | 0.62 |
13-037 | M | 43 | DTOX | EUR | PDGFD | 6 | c.883C>T | p.(Arg295Cys) | D-Mis | 4.00E−06 | 35.0 | 0.56 |
23-025 | F | 41 | IPAH | EUR | PDGFD | 6 | c.926C>G | p.Ser309Cys | D-Mis | – | 28.4 | 0.22 |
E000820 | F | 73 | IPAH | EUR | PDGFD | 6 | c.961T>A | p.(Tyr321Asn) | D-Mis | 1.21E−05 | 33.0 | 0.34 |
E010173 | F | 74 | IPAH | EUR | PDGFD | 6 | c.961T>A | p.(Tyr321Asn) | D-Mis | 1.21E−05 | 33.0 | 0.34 |
*Rare, deleterious variants defined as gnomAD_exome_ALL AF ≤ 1.00E−04 and LGD or missense with variable REVEL cut-off (FBLN2 0.92 and PDGFD 0.22)
** Cases are heterozygous for the indicated variants
***Transcripts: FBLN2 NM_001998.3 and PDGFD NM_033135.4