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. 2021 May 11;12:2716. doi: 10.1038/s41467-021-22705-z

Table 1.

Summary of M. tuberculosis genotypes found in the surgical cohort.

Patient Infection G1 Lin. G1 DRP G2 Lin. G2 DRP Dist. C I E H N S
G018 Clonal L2.2.10 XDR 0 G1 G1 G1 G1 G1 G1
G021 Clonal L2.2.10 Pre-XDR 0 G1 G1
G023 Clonal L4.2.1 Sus. 1 G1 G1
G025 Clonal L2.2.10 Pre-XDR 0 G1 G1
G031 Clonal L2.2.10 Pre-XDR 2 G1 G1 G1 G1
G032 Clonal L2.2.9 MDR 0 G1 G1
G034 Clonal L2.2.10 Pre-XDR 0 G1 G1 G1 G1 G1 G1
G035 Clonal L.2.2.9 Pre-XDR 0 G1 G1 G1 G1 G1 G1
G085 Clonal L2.2.10 Pre-XDR 2 G1 G1 G1 G1 G1 G1
G330 Clonal L2.2.10 Sus. 0 G1 G1
G335 Clonal L2.2.10 Sus. 0 G1 G1 G1 G1 G1 G1
G033 Polyclonal L4.3.3 Pre-XDR L4.2.1 Sus. 611 G1 G1 G1 M M G1
G039 Polyclonal L2.2.9 Pre-XDR L2.2.10 Pre-XDR 105 M M M M G2 G2
G240 Polyclonal L4.8 Sus. L4.8 Sus. 162 M G1
G019 Polyclonal L2.2.10 MDR L2.2.10 Pre-XDR 120 G1 G2
G036 Polyclonal L2.2.9 MDR L4.8 Sus. 1132 G1 G2
G324 Polyclonal L2.2.10 Sus. L2.2.10 Pre-XDR 128 G1 G1 G1 G1 G1 G2
G327 Polyclonal L4.3.3 Sus. L2.2.10 Pre-XDR 1116 G1 G2

Lineage (Lin.) and drug resistance profile (DRP) of the different genotypes (G1, G2), as well as their genetic distances (Dist.) are shown.

Genotype locations are indicated with: G1 genotype 1, G2 genotype 2, M mix, – no sample available.

C caseum, I inner wall, E external wall, H healthy tissue, N nodule, S sputum.