Table 1.
Patient | Infection | G1 Lin. | G1 DRP | G2 Lin. | G2 DRP | Dist. | C | I | E | H | N | S |
---|---|---|---|---|---|---|---|---|---|---|---|---|
G018 | Clonal | L2.2.10 | XDR | – | – | 0 | G1 | G1 | G1 | G1 | G1 | G1 |
G021 | Clonal | L2.2.10 | Pre-XDR | – | – | 0 | G1 | – | – | – | – | G1 |
G023 | Clonal | L4.2.1 | Sus. | – | – | 1 | G1 | – | – | – | – | G1 |
G025 | Clonal | L2.2.10 | Pre-XDR | – | – | 0 | G1 | – | – | – | – | G1 |
G031 | Clonal | L2.2.10 | Pre-XDR | – | – | 2 | G1 | G1 | G1 | – | – | G1 |
G032 | Clonal | L2.2.9 | MDR | – | – | 0 | G1 | – | – | – | – | G1 |
G034 | Clonal | L2.2.10 | Pre-XDR | – | – | 0 | G1 | G1 | G1 | G1 | G1 | G1 |
G035 | Clonal | L.2.2.9 | Pre-XDR | – | – | 0 | G1 | G1 | G1 | G1 | G1 | G1 |
G085 | Clonal | L2.2.10 | Pre-XDR | – | – | 2 | G1 | G1 | G1 | G1 | G1 | G1 |
G330 | Clonal | L2.2.10 | Sus. | – | – | 0 | G1 | – | – | – | – | G1 |
G335 | Clonal | L2.2.10 | Sus. | – | – | 0 | G1 | G1 | G1 | G1 | G1 | G1 |
G033 | Polyclonal | L4.3.3 | Pre-XDR | L4.2.1 | Sus. | 611 | G1 | G1 | G1 | M | M | G1 |
G039 | Polyclonal | L2.2.9 | Pre-XDR | L2.2.10 | Pre-XDR | 105 | M | M | M | M | G2 | G2 |
G240 | Polyclonal | L4.8 | Sus. | L4.8 | Sus. | 162 | M | – | – | – | – | G1 |
G019 | Polyclonal | L2.2.10 | MDR | L2.2.10 | Pre-XDR | 120 | G1 | – | – | – | – | G2 |
G036 | Polyclonal | L2.2.9 | MDR | L4.8 | Sus. | 1132 | G1 | – | – | – | – | G2 |
G324 | Polyclonal | L2.2.10 | Sus. | L2.2.10 | Pre-XDR | 128 | G1 | G1 | G1 | G1 | G1 | G2 |
G327 | Polyclonal | L4.3.3 | Sus. | L2.2.10 | Pre-XDR | 1116 | G1 | – | – | – | – | G2 |
Lineage (Lin.) and drug resistance profile (DRP) of the different genotypes (G1, G2), as well as their genetic distances (Dist.) are shown.
Genotype locations are indicated with: G1 genotype 1, G2 genotype 2, M mix, – no sample available.
C caseum, I inner wall, E external wall, H healthy tissue, N nodule, S sputum.