Table 1.

Geotemporal distribution of 1935 S. sonnei genomes in the discovery dataset.

	Region	Country	Year(s) of isolation	No. of isolates
Africa	Total		1967–2006	19 (0.98%)
	Central Africa	Cameroon	1973	1
	East Africa	Madagascar	1998–2000	3
		Kenya, Tanzania	2004	2
	Northern Africa	Egypt	2005–2006	4
		Morocco	2005–2006	4
	West Africa	Senegal	1967–2006	4
		Burkina Faso	2006	1
Asia	Total		1979–2014	627 (32.4%)
	Central Asia	Uzbekistan	2005	1
	Eastern Asia	Korea	1979–2003	20
	Southern Asia	Bhutan	2011–2013	71
		India	2013–2014	24
		Pakistan	2002–2003	7
		Other (Nepal, Iran, Sri Lanka)	2003–2006	3
	Southeast Asia	Cambodia	2013–2014	4
		Thailand	1994–2013	9
		Vietnam	1995–2015	266
	Western Asia	Israel	1992–2014	222
Europe	Total		1943–2016	567 (29.3%)
	Northern Europe	United Kingdom	1990–2016	393
		Ireland	Unknown	5
		Sweden	1943–1947	6
		Denmark	1945	1
	Western Europe	France	1945–2014	158
		Belgium	2008	3
		Germany	Unknown	1
Northern America	Total		1994–2015	16 (0.8%)
	North America	USA	2004–2015	13
		Other (unknown)	1994–1995	3
Latin America and the Caribbean	Total		1997–2014	337 (17.4%)
	Caribbean	Cuba, Dominican Republic, Haiti	2003–2006	3
	Central America	Costa Rica	2002–2010	50
		Guatemala	2011–2012	30
		Mexico	1998	1
	South America	Argentina	2002–2011	50
		Brazil	1997–2002	7
		Chile	2010–2011	27
		Colombia	2008–2011	30
		French Guiana	1998–2006	3
		Paraguay	2008–2012	18
		Peru	1999–2012	49
		Uruguay	2000–2011	28
		Venezuela	1997–2014	41
Australia and Oceania	Total		1997–2018	364 (18.8%)
	Australia	Australia	2016–2018	363
	Oceania	New Caledonia	1997	1
Unknown	Total		Unspecified	5 (0.5%)